Department of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul 130-701, Republic of Korea.
Int J Syst Evol Microbiol. 2014 Jan;64(Pt 1):72-77. doi: 10.1099/ijs.0.054585-0. Epub 2013 Sep 6.
A novel Gram-stain-negative, aerobic, non-motile, yellow-pigmented and rod-shaped bacterium, designated strain WB5(T), was isolated from the intestinal tract of an abalone, Haliotis discus hannai, collected from the northern coast of Jeju in Korea. The isolate grew optimally at 30 °C, at pH 7 and in the presence of 0.5 % (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain WB5(T) was clustered in the genus Cloacibacterium and shared the highest sequence similarity with C. normanense (98.2 % similarity). The predominant fatty acids were iso-C15 : 0 and iso-C17 : 0 3-OH. Menaquinone-6 was the major respiratory quinone. The genomic DNA G+C content was 29.6 mol%. The DNA-DNA hybridization values indicated <22 % genomic relatedness with other members of the genus Cloacibacterium. The results of physiological, biochemical, chemotaxonomic and genotypic analyses showed that strain WB5(T) represents a novel species of the genus Cloacibacterium, for which the name Cloacibacterium haliotis sp. nov. is proposed. The type strain is WB5(T) ( = KACC 17210(T) = JCM 18869(T)).
一株革兰氏阴性、需氧、非运动、黄色、杆状细菌,被命名为 WB5(T) 菌株,从韩国济州岛北部海岸采集的鲍鱼 Haliotis discus hannai 的肠道中分离得到。该分离物在 30°C、pH7 和 0.5%(w/v)NaCl 存在下生长最佳。基于 16S rRNA 基因序列的系统发育分析表明,菌株 WB5(T) 聚类在 Cloacibacterium 属中,与 Cloacibacterium normanense 的序列相似度最高(98.2%相似度)。主要脂肪酸为 iso-C15:0 和 iso-C17:0 3-OH。menaquinone-6 是主要的呼吸醌。基因组 DNA G+C 含量为 29.6 mol%。DNA-DNA 杂交值表明与 Cloacibacterium 属的其他成员的基因组相关性<22%。生理、生化、化学分类和基因型分析的结果表明,菌株 WB5(T) 代表 Cloacibacterium 属的一个新种,建议将其命名为 Cloacibacterium haliotis sp. nov.。模式菌株为 WB5(T)(=KACC 17210(T)=JCM 18869(T))。