Botswana Harvard HIV Reference Laboratory, Princess Marina Hospital, 1836 North Ring Road, Gaborone, Botswana; National Health Laboratory, 5353 Church Road, Extension 10, Gaborone, Botswana.
J Virol Methods. 2013 Dec;194(1-2):217-21. doi: 10.1016/j.jviromet.2013.08.031. Epub 2013 Sep 8.
The sample requirement of 1 mL for the Roche COBAS AmpliPrep/COBAS TaqMan HIV-1 test, version 2.0 (CAP CTM HIV v2.0) limits its utility in measuring plasma HIV-1 RNA levels for small volume samples from children infected with HIV-1. Viral load monitoring is the standard of care for HIV-1-infected patients on antiretroviral therapy in Botswana. The study aimed to validate the dilution of small volume samples with phosphate buffered saline (1× PBS) when quantifying HIV-1 RNA in patient plasma. HIV RNA concentrations were determined in undiluted and diluted pairs of samples comprising panels of quality assessment standards (n=52) as well as patient samples (n=325). There was strong correlation (R(2)) of 0.98 and 0.95 within the dynamic range of the CAP CTM HIV v2.0 test between undiluted and diluted samples from quality assessment standards and patients, respectively. The difference between viral load measurements of diluted and undiluted pairs of quality assessment standards and patient samples using the Altman-Bland test showed that the 95% limits of agreement were between -0.40 Log 10 and 0.49 Log 10. This difference was within the 0.5 Log 10 which is generally considered as normal assay variation of plasma RNA levels. Dilution of samples with 1× PBS produced comparable viral load measurements to undiluted samples.
罗氏 COBAS AmpliPrep/COBAS TaqMan HIV-1 试验(第 2.0 版)(CAP CTM HIV v2.0)的样本要求为 1 毫升,这限制了其在测量 HIV-1 感染儿童小体积样本血浆 HIV-1 RNA 水平方面的应用。病毒载量监测是博茨瓦纳接受抗逆转录病毒治疗的 HIV-1 感染患者的标准护理。本研究旨在验证用磷酸盐缓冲盐水(1×PBS)稀释小体积样本时,在患者血浆中定量 HIV-1 RNA 的方法。未稀释和稀释的样本对(由质量评估标准(n=52)和患者样本(n=325)组成)中 HIV RNA 浓度进行了测定。在 CAP CTM HIV v2.0 试验的动态范围内,质量评估标准和患者的未稀释和稀释样本之间的相关性(R(2))分别为 0.98 和 0.95。使用 Altman-Bland 检验比较稀释和未稀释样本对的质量评估标准和患者样本的病毒载量测量结果,发现 95%的一致性界限在-0.40 Log 10 和 0.49 Log 10 之间。这种差异在 0.5 Log 10 内,通常被认为是血浆 RNA 水平的正常分析变异。用 1×PBS 稀释样本可产生与未稀释样本相当的病毒载量测量结果。