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RAPD 和细胞器特异性 PCR 再次证实了咖啡属内的分类关系。

RAPD and organelle specific PCR re-affirms taxonomic relationships within the genus Coffea.

机构信息

Scottish Crop Research Institute, DD2 5DA, Invergowrie, Dundee, Scotland.

出版信息

Plant Cell Rep. 1996 Jan;15(5):337-41. doi: 10.1007/BF00232367.

DOI:10.1007/BF00232367
PMID:24178353
Abstract

The phenetic relationships between 18 Coffea accessions representing 11 of the most important Coffea species employed in current breeding programmes were examined using RAPD markers and chloroplast and mitochondrial genome specific sequence tagged sites (STS). Estimates of variability based on the number of shared RAPD amplification products placed the species into three distinct groups which were consistent with derived chloroplast DNA phenotypes, the geographical origins of the species and previous studies based on morphological characteristics and RFLPs. C. eugenioides (2n = 2x = 22) exhibited the greatest similarity to the cultivated C. arabica (2n = 4x = 44) and may represent its maternal progenitor. The results are discussed in the context of strategies for Coffea improvement.

摘要

利用 RAPD 标记和叶绿体及线粒体基因组特异序列标记位点(STS),研究了代表当前育种计划中 11 个最重要咖啡种的 18 个咖啡栽培品种间的表型关系。基于共享 RAPD 扩增产物数量的变异性估计,将这些种分为三个不同的组,这与衍生的叶绿体 DNA 表型、种的地理起源以及以前基于形态特征和 RFLP 的研究一致。C. eugenioides(2n=2x=22)与栽培的 C. arabica(2n=4x=44)表现出最大的相似性,可能代表其母本祖先。讨论结果时考虑了咖啡改良的策略。

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本文引用的文献

1
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Theor Appl Genet. 1983 Apr;65(1):77-84. doi: 10.1007/BF00276268.
2
Identification of broccoli and cauliflower cultivars with RAPD markers.利用 RAPD 标记鉴定西兰花和花椰菜品种。
Plant Cell Rep. 1991 Dec;10(10):505-11. doi: 10.1007/BF00234583.
3
Genetic fingerprinting of Theobroma clones using randomly amplified polymorphic DNA markers.利用随机扩增多态性 DNA 标记对可可克隆进行遗传指纹图谱分析。
开发微卫星标记用于鉴定巴西阿拉伯咖啡品种。
Genet Mol Biol. 2010 Jul;33(3):507-14. doi: 10.1590/S1415-47572010005000055. Epub 2010 Sep 1.
4
Development of new genomic microsatellite markers from robusta coffee (Coffea canephora Pierre ex A. Froehner) showing broad cross-species transferability and utility in genetic studies.从罗布斯塔咖啡(Coffea canephora Pierre ex A. Froehner)开发新的基因组微卫星标记,这些标记在遗传研究中显示出广泛的跨物种转移性和实用性。
BMC Plant Biol. 2008 Apr 30;8:51. doi: 10.1186/1471-2229-8-51.
5
Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species.用于咖啡及相关物种基因组分析的EST衍生基因微卫星标记的鉴定、表征与利用
Theor Appl Genet. 2007 Jan;114(2):359-72. doi: 10.1007/s00122-006-0440-x. Epub 2006 Nov 18.
6
Stable transformation and direct regeneration in Coffea canephora P ex. Fr. by Agrobacterium rhizogenes mediated transformation without hairy-root phenotype.发根农杆菌介导的咖啡(Coffea canephora P ex. Fr.)稳定转化及直接再生,无毛状根表型。
Plant Cell Rep. 2006 Mar;25(3):214-22. doi: 10.1007/s00299-005-0045-x. Epub 2005 Dec 6.
Theor Appl Genet. 1992 Apr;83(6-7):871-7. doi: 10.1007/BF00226710.
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