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新种哥伦比亚篮状菌以及篮状菌进化枝2a中的系统发育一致性分析

Talaromyces columbinus sp. nov., and genealogical concordance analysis in Talaromyces clade 2a.

作者信息

Peterson Stephen W, Jurjević Zeljko

机构信息

Bacterial Foodborne Pathogens and Mycology Research Unit, United States Department of Agriculture, Peoria, Illinois, United States of America.

出版信息

PLoS One. 2013 Oct 30;8(10):e78084. doi: 10.1371/journal.pone.0078084. eCollection 2013.

Abstract

During the course of mold surveys, a set of Talaromyces isolates were obtained that did not fit any described species. Phenotypic examination of these isolates showed that they were similar to T. piceus but differed in some growth characteristics. Multilocus DNA sequence data were obtained for the new isolates and some related species in the broader, more inclusive clade, and the data were analyzed using genealogical concordance. The new isolates are described as Talaromyces columbinus. From analysis of the related species, Penicillium rugulosum var. atricolum is given species status in Talaromyces as T. atricola. Penicillium tardum and P. chrysitis were showed to be synonyms of T. rugulosus. Penicillium scorteum and T. phialosporus were showed to be conspecific and under the rule of priority T. scorteus is the proper name for isolates previously known as T. phialosporus. Talaromyces wortmanii was showed to be distinct from Penicillium concavorugulosum and T. variabilis but the relationship of the latter two species remains unresolved. Examination of ITS sequences from GenBank showed that T. columbinus has previously been reported from human lung infections under the name Penicillium piceum.

摘要

在霉菌调查过程中,获得了一组不符合任何已描述物种的拟青霉属分离株。对这些分离株的表型检查表明,它们与云杉拟青霉相似,但在一些生长特征上有所不同。获得了新分离株以及更广泛、包容性更强的进化枝中一些相关物种的多位点DNA序列数据,并使用系统发育一致性对数据进行了分析。新分离株被描述为哥伦比亚拟青霉。通过对相关物种的分析,皱纹青霉变种黑绿青霉在拟青霉属中被赋予物种地位,即黑绿拟青霉。迟缓青霉和金黄青霉被证明是皱纹拟青霉的同义词。黑壳青霉和瓶梗拟青霉被证明是同种,根据优先权规则,瓶梗拟青霉是以前称为瓶梗拟青霉的分离株的正确名称。沃特曼拟青霉被证明与凹皱青霉和可变拟青霉不同,但后两个物种之间的关系仍未解决。对来自GenBank的ITS序列的检查表明,哥伦比亚拟青霉以前曾以云杉青霉的名称从人类肺部感染中报道过。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b542/3813520/e068f5aece52/pone.0078084.g001.jpg

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