Tsang Chi-Ching, Tang James Y M, Lau Susanna K P, Woo Patrick C Y
Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong.
Research Centre of Infection and Immunology, The University of Hong Kong, Hong Kong.
Comput Struct Biotechnol J. 2018 May 31;16:197-210. doi: 10.1016/j.csbj.2018.05.003. eCollection 2018.
, and are diverse, phenotypically polythetic genera encompassing species important to the environment, economy, biotechnology and medicine, causing significant social impacts. Taxonomic studies on these fungi are essential since they could provide invaluable information on their evolutionary relationships and define criteria for species recognition. With the advancement of various biological, biochemical and computational technologies, different approaches have been adopted for the taxonomy of , and ; for example, from traditional morphotyping, phenotyping to chemotyping (e.g. lipotyping, proteotypingand metabolotyping) and then mitogenotyping and/or phylotyping. Since different taxonomic approaches focus on different sets of characters of the organisms, various classification and identification schemes would result. In view of this, the consolidated species concept, which takes into account different types of characters, is recently accepted for taxonomic purposes and, together with the lately implemented 'One Fungus - One Name' policy, is expected to bring a more stable taxonomy for , and , which could facilitate their evolutionary studies. The most significant taxonomic change for the three genera was the transfer of subgenus to (e.g. the medically important thermally dimorphic '' endemic in Southeast Asia is now named ), leaving both and as monophyletic genera. Several distantly related -like fungi were also segregated from , making this genus, containing members of both sexual and asexual morphs, monophyletic as well. In the current omics era, application of various state-of-the-art omics technologies is likely to provide comprehensive information on the evolution of , and and a stable taxonomy will hopefully be achieved.
[具体属名1]、[具体属名2]和[具体属名3]是多样的、表型多性状的属,包含对环境、经济、生物技术和医学重要的物种,会造成重大社会影响。对这些真菌的分类学研究至关重要,因为它们能提供有关其进化关系的宝贵信息,并为物种识别定义标准。随着各种生物学、生物化学和计算技术的进步,已对[具体属名1]、[具体属名2]和[具体属名3]采用了不同的分类方法;例如,从传统的形态分型、表型分型到化学分型(如脂类分型、蛋白质分型和代谢物分型),再到有丝分裂基因分型和/或系统发育分型。由于不同的分类方法关注生物体的不同特征集,会产生各种分类和鉴定方案。有鉴于此,考虑到不同类型特征的综合物种概念最近被用于分类目的,并且连同最近实施的“一种真菌 - 一个名称”政策,有望为[具体属名1]、[具体属名2]和[具体属名3]带来更稳定的分类学,这有助于它们的进化研究。这三个属最显著的分类学变化是将[具体属名1]的[具体亚属名]转移到[具体属名2](例如,东南亚特有的医学上重要的热双态性“[具体种名]”现在被命名为[新种名]),使[具体属名1]和[具体属名2]都成为单系属。几种远缘的[类似属名]样真菌也从[具体属名1]中分离出来,使得这个包含有性和无性形态成员的属也成为单系属。在当前的组学时代,应用各种最先进的组学技术可能会提供关于[具体属名1]、[具体属名2]和[具体属名3]进化的全面信息,有望实现稳定的分类学。