Saravanan Sanjeev Rajagopalan, Paul Vivek Daniel, George Shilpa, Sundarrajan Sudarson, Kumar Nirmal, Hebbur Madhavi, Kumar Naveen, Veena Ananda, Maheshwari Uma, Appaiah Chemira Biddappa, Chidambaran Muralidharan, Bhat Anuradha Gopal, Hariharan Sukumar, Padmanabhan Sriram
Molecular Biology Team; Gangagen Biotechnologies Pvt. Ltd.; Bangalore, India.
Bacteriophage. 2013 Jul 1;3(3):e26564. doi: 10.4161/bact.26564. Epub 2013 Oct 2.
P128 is a chimeric anti-staphylococcal protein having a catalytic domain from a bacteriophage K tail associated structural protein and a cell wall targeting domain from the bacteriocin-lysostaphin. In this study, we disclose additional properties of P128 and compared the same with lysostaphin. While lysostaphin was found to get inactivated by heat and was inactive on its parent strain biovar , P128 was thermostable and was lytic towards biovar demonstrating a difference in their mechanism of action. Selected mutation studies of the catalytic domain of P128 showed that arginine and cysteine, at 40th and 76th positions respectively, are critical for the staphylolytic activity of P128, although these amino acids are not conserved residues. In comparison to native P128, only the R40S mutant (P301) was catalytically active on zymogram gel and had a similar secondary structure, as assessed by circular dichroism analysis and in silico modeling with similar cell binding properties. Mutation of the arginine residue at 40th position of the P128 molecule caused dramatic reduction in the V (∆OD [mg/min]) value (nearly 270 fold) and the recombinant lysostaphin also showed lesser V value (nearly 1.5 fold) in comparison to the unmodified P128 protein. The kinetic parameters such as apparent K (K) and apparent K (K) of the native P128 protein also showed significant differences in comparison to the values observed for P301 and lysostaphin.
P128是一种嵌合抗葡萄球菌蛋白,其具有来自噬菌体K尾部相关结构蛋白的催化结构域和来自溶葡萄球菌素的细胞壁靶向结构域。在本研究中,我们揭示了P128的其他特性,并将其与溶葡萄球菌素进行了比较。虽然发现溶葡萄球菌素会因加热而失活,并且对其亲本菌株生物变种无活性,但P128具有热稳定性,并且对生物变种具有裂解作用,这表明它们的作用机制存在差异。对P128催化结构域的选定突变研究表明,分别位于第40位和第76位的精氨酸和半胱氨酸对P128的葡萄球菌溶解活性至关重要,尽管这些氨基酸不是保守残基。与天然P128相比,只有R40S突变体(P301)在酶谱凝胶上具有催化活性,并且通过圆二色性分析和计算机模拟评估具有相似的二级结构和细胞结合特性。P128分子第40位精氨酸残基的突变导致V(∆OD[mg/min])值急剧降低(近270倍),并且与未修饰的P128蛋白相比,重组溶葡萄球菌素的V值也较低(近1.5倍)。天然P128蛋白的动力学参数,如表观K(K)和表观K(K),与P301和溶葡萄球菌素的值相比也显示出显著差异。