Liu Guo-Hua, Zhao Lei, Song Hui-Qun, Zhao Guang-Hui, Cai Jin-Zhong, Zhao Quan, Zhu Xing-Quan
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province 730046, PR China.
Parasit Vectors. 2014 Jan 22;7:44. doi: 10.1186/1756-3305-7-44.
Gastrointestinal nematodes of livestock have major socio-economic importance worldwide. In small ruminants, Chabertia spp. are responsible for economic losses to the livestock industries globally. Although much attention has given us insights into epidemiology, diagnosis, treatment and control of this parasite, over the years, only one species (C. ovina) has been accepted to infect small ruminants, and it is not clear whether C. erschowi is valid as a separate species.
The first and second internal transcribed spacers (ITS-1 and ITS-2) regions of nuclear ribosomal DNA (rDNA) and the complete mitochondrial (mt) genomes of C. ovina and C. erschowi were amplified and then sequenced. Phylogenetic re-construction of 15 Strongylida species (including C. erschowi) was carried out using Bayesian inference (BI) based on concatenated amino acid sequence datasets.
The ITS rDNA sequences of C. ovina China isolates and C. erschowi samples were 852-854 bp and 862 -866 bp in length, respectively. The mt genome sequence of C. erschowi was 13,705 bp in length, which is 12 bp shorter than that of C. ovina China isolate. The sequence difference between the entire mt genome of C. ovina China isolate and that of C. erschowi was 15.33%. In addition, sequence comparison of the most conserved mt small subunit ribosomal (rrnS) and the least conserved nad2 genes among multiple individual nematodes revealed substantial nucleotide differences between these two species but limited sequence variation within each species.
The mtDNA and rDNA datasets provide robust genetic evidence that C. erschowi is a valid strongylid nematode species. The mtDNA and rDNA datasets presented in the present study provide useful novel markers for further studies of the taxonomy and systematics of the Chabertia species from different hosts and geographical regions.
家畜胃肠道线虫在全球具有重大的社会经济意义。在小型反刍动物中,夏伯特属线虫给全球畜牧业造成经济损失。尽管多年来人们对这种寄生虫的流行病学、诊断、治疗和控制给予了很多关注,但目前仅有一种(绵羊夏伯特线虫)被认为可感染小型反刍动物,而埃氏夏伯特线虫是否为独立物种尚不清楚。
扩增了绵羊夏伯特线虫和埃氏夏伯特线虫核糖体DNA(rDNA)的第一和第二内部转录间隔区(ITS-1和ITS-2)以及完整的线粒体(mt)基因组,然后进行测序。基于串联氨基酸序列数据集,使用贝叶斯推断(BI)对包括埃氏夏伯特线虫在内的15种圆线目物种进行了系统发育重建。
中国分离的绵羊夏伯特线虫和埃氏夏伯特线虫样本的ITS rDNA序列长度分别为852 - 854 bp和862 - 866 bp。埃氏夏伯特线虫的mt基因组序列长度为13,705 bp,比中国分离的绵羊夏伯特线虫短12 bp。中国分离的绵羊夏伯特线虫与埃氏夏伯特线虫的整个mt基因组序列差异为15.33%。此外,多个个体线虫中最保守的mt小亚基核糖体(rrnS)和最不保守的nad2基因的序列比较显示,这两个物种之间存在大量核苷酸差异,但每个物种内的序列变异有限。
mtDNA和rDNA数据集提供了有力的遗传学证据,证明埃氏夏伯特线虫是一个有效的圆线目线虫物种。本研究中呈现的mtDNA和rDNA数据集为进一步研究来自不同宿主和地理区域的夏伯特属线虫的分类学和系统学提供了有用的新标记。