United States Department of Agriculture, Agricultural Research Service, Plant Genetics Research Unit, Donald Danforth Plant Science Center, St. Louis, Missouri, United States of America.
Purdue University, Department of Horticulture and Landscape Architecture, West Lafayette, Indiana, United States of America.
PLoS One. 2014 Jan 29;9(1):e87628. doi: 10.1371/journal.pone.0087628. eCollection 2014.
The ionome, or elemental profile, of a maize kernel can be viewed in at least two distinct ways. First, the collection of elements within the kernel are food and feed for people and animals. Second, the ionome of the kernel represents a developmental end point that can summarize the life history of a plant, combining genetic programs and environmental interactions. We assert that single-kernel-based phenotyping of the ionome is an effective method of analysis, as it represents a reasonable compromise between precision, efficiency, and power. Here, we evaluate potential pitfalls of this sampling strategy using several field-grown maize sample sets. We demonstrate that there is enough genetically determined diversity in accumulation of many of the elements assayed to overcome potential artifacts. Further, we demonstrate that environmental signals are detectable through their influence on the kernel ionome. We conclude that using single kernels as the sampling unit is a valid approach for understanding genetic and environmental effects on the maize kernel ionome.
玉米子粒的离子组(或元素图谱)可以从至少两种截然不同的角度来观察。首先,子粒中的元素集合是人类和动物的食物和饲料。其次,子粒的离子组代表了一个发育终点,可以总结植物的生命史,结合遗传程序和环境相互作用。我们断言,基于单粒子的离子组表型分析是一种有效的分析方法,因为它在精度、效率和功效之间达成了合理的妥协。在这里,我们使用几个田间生长的玉米样本集来评估这种采样策略的潜在缺陷。我们证明,在所测定的许多元素的积累中,存在足够的遗传决定的多样性,可以克服潜在的假象。此外,我们证明环境信号可以通过其对内核离子组的影响而被检测到。我们得出结论,使用单个内核作为采样单位是一种有效的方法,可以理解遗传和环境对玉米内核离子组的影响。