Riedel Thomas, Fiebig Anne, Petersen Jörn, Gronow Sabine, Kyrpides Nikos C, Göker Markus, Klenk Hans-Peter
UPMC Université Paris 6, UMR 7621, Observatoire Océanologique, Banyuls-sur-Mer, France ; CNRS, UMR 7621, LOMIC, Observatoire Océanologique, Banyuls-sur-Mer, France.
Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures Braunschweig, Germany.
Stand Genomic Sci. 2013 Oct 1;9(1):117-27. doi: 10.4056/sigs.4258318. eCollection 2013 Oct 16.
Litoreibacter arenae Kim et al. 2012 is a member of the genomically well-characterized Rhodobacteraceae clade within the Roseobacter clade. Representatives of this clade are known to be metabolically versatile and involved in marine carbon-producing and biogeochemical processes. They form a physiologically heterogeneous group of Alphaproteobacteria and were mostly found in coastal or polar waters, especially in symbiosis with algae, in microbial mats, in sediments or together with invertebrates and vertebrates. Here we describe the features of L. arenae DSM 19593(T), including novel aspects of its phenotype, together with the draft genome sequence and annotation. The 3,690,113 bp long genome consists of 17 scaffolds with 3,601 protein-coding and 56 RNA genes. This genome was sequenced as part of the activities of the Transregional Collaborative Research Centre 51 funded by the German Research Foundation (DFG).
沙滩海岸红杆菌（Litoreibacter arenae）Kim等人于2012年发现，它是玫瑰杆菌进化枝中基因组特征明确的红杆菌科进化枝的成员。已知该进化枝的代表具有多种代谢功能，参与海洋碳生产和生物地球化学过程。它们构成了一群生理特性各异的α-变形菌，大多发现于沿海水域或极地水域，特别是与藻类共生、在微生物垫、沉积物中，或与无脊椎动物和脊椎动物共生。在此，我们描述了沙滩海岸红杆菌DSM 19593(T)的特征，包括其表型的新特点，以及基因组草图序列和注释。该基因组长度为3,690,113 bp，由17个支架组成，有3,601个蛋白质编码基因和56个RNA基因。该基因组是作为德国研究基金会（DFG）资助的跨区域合作研究中心51项目活动的一部分进行测序的。
