龙虾的出现:一个古老族群(十足目:无螯下目、螯虾下目、古虾下目、多螯下目)的系统发育关系、形态进化和分歧时间比较。

The emergence of lobsters: phylogenetic relationships, morphological evolution and divergence time comparisons of an ancient group (decapoda: achelata, astacidea, glypheidea, polychelida).

机构信息

Department of Biology, Florida International University, 3000 NE 151st Street, North Miami, FL 33181, USA;

Australian Museum, 6 College Street, Sydney, NSW 2010, Australia;University of New South Wales, Kensington, NSW 2052, Australia;

出版信息

Syst Biol. 2014 Jul;63(4):457-79. doi: 10.1093/sysbio/syu008. Epub 2014 Feb 20.

Abstract

Lobsters are a ubiquitous and economically important group of decapod crustaceans that include the infraorders Polychelida, Glypheidea, Astacidea and Achelata. They include familiar forms such as the spiny, slipper, clawed lobsters and crayfish and unfamiliar forms such as the deep-sea and "living fossil" species. The high degree of morphological diversity among these infraorders has led to a dynamic classification and conflicting hypotheses of evolutionary relationships. In this study, we estimated phylogenetic relationships among the major groups of all lobster families and 94% of the genera using six genes (mitochondrial and nuclear) and 195 morphological characters across 173 species of lobsters for the most comprehensive sampling to date. Lobsters were recovered as a non-monophyletic assemblage in the combined (molecular + morphology) analysis. All families were monophyletic, with the exception of Cambaridae, and 7 of 79 genera were recovered as poly- or paraphyletic. A rich fossil history coupled with dense taxon coverage allowed us to estimate and compare divergence times and origins of major lineages using two drastically different approaches. Age priors were constructed and/or included based on fossil age information or fossil discovery, age, and extant species count data. Results from the two approaches were largely congruent across deep to shallow taxonomic divergences across major lineages. The origin of the first lobster-like decapod (Polychelida) was estimated in the Devonian (∼409-372 Ma) with all infraorders present in the Carboniferous (∼353-318 Ma). Fossil calibration subsampling studies examined the influence of sampling density (number of fossils) and placement (deep, middle, and shallow) on divergence time estimates. Results from our study suggest including at least 1 fossil per 10 operational taxonomic units (OTUs) in divergence dating analyses. [Dating; decapods; divergence; lobsters; molecular; morphology; phylogenetics.].

摘要

龙虾是一种普遍存在且具有重要经济价值的十足目甲壳动物,包括多板类、短尾类、螯虾类和异尾类等亚目。它们包括熟悉的刺龙虾、拖鞋龙虾、螯龙虾和淡水小龙虾,以及不常见的深海和“活化石”物种。这些亚目中形态多样性程度很高,导致分类动态和进化关系假说相互矛盾。在这项研究中,我们使用 6 个基因(线粒体和核基因)和 195 个形态特征,对龙虾所有主要科的 94%的属进行了分析,共涉及 173 个龙虾物种,这是迄今为止最全面的采样。在联合(分子+形态)分析中,龙虾被恢复为一个非单系组合。所有科都是单系的,除了囊虾科,79 个属中的 7 个被恢复为多系或并系。丰富的化石历史加上密集的分类群覆盖,使我们能够使用两种截然不同的方法估计和比较主要谱系的分歧时间和起源。年龄先验值是根据化石年龄信息或化石发现、年龄和现存物种数量数据构建和/或包含的。这两种方法的结果在主要谱系的深层到浅层分类学分歧上基本一致。第一只类似龙虾的十足目(多板类)的起源被估计在泥盆纪(约 4.09-3.72 亿年前),所有亚目都存在于石炭纪(约 3.53-3.18 亿年前)。化石校准抽样研究检验了采样密度(化石数量)和位置(深、中、浅)对分歧时间估计的影响。我们的研究结果表明,在进行分歧时间分析时,每个分类单元(OTU)至少需要包含 1 个化石。[定年;十足目;分歧;龙虾;分子;形态;系统发育学。]

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索