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通过mRNA和lncRNA表达谱筛选研究PinX1在乳腺癌细胞生长控制中的作用及其潜在分子机制。

The role of PinX1 in growth control of breast cancer cells and its potential molecular mechanism by mRNA and lncRNA expression profiles screening.

作者信息

Shi Rong, Zhou Jue-Yu, Zhou Hui, Zhao Zhen, Liang Sang-Hua, Zheng Wen-Ling, Ma Wen-Li

机构信息

Institute of Genetic Engineering, Southern Medical University, Guangzhou 510515, China.

Nan Fang Hospital, Southern Medical University, Guangzhou 510515, China.

出版信息

Biomed Res Int. 2014;2014:978984. doi: 10.1155/2014/978984. Epub 2014 Feb 3.

DOI:10.1155/2014/978984
PMID:24672800
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3929369/
Abstract

As a major tumor suppressor gene, the role of PinX1 in breast cancer and its molecular mechanism remain unclear. In this study, overexpression of PinX1 was generated in 3 breast cancer cell lines, and knockdown of PinX1 was performed in a nontumorigenic breast cell line. The regulation of PinX1 on cell proliferation and cell cycle was observed. A microarray-based lncRNA and mRNA expression profile screening was also performed. We found a lower growth rate, G0/G1 phase arrest, and S phase inhibition in the PinX1 overexpressed breast cancer cells, while a higher growth rate, decreased G0/G1 phase, and increased S phase rate in the PinX1 knocked-down nontumorigenic breast cell. A total of 977 mRNAs and 631 lncRNAs were identified as differentially expressed transcripts between PinX1 overexpressed and control MCF-7 cells. Further analysis identified the involvement of these mRNAs in 52 cancer related pathways and various other biological processes. 11 enhancer-like lncRNAs and 25 lincRNAs with their adjacent mRNA pairs were identified as coregulated transcripts. Our results confirmed the role of PinX1 as a major tumor suppressor gene in breast cancer cell lines and provided information for further research on the molecular mechanisms of PinX1 in tumorigenesis.

摘要

作为一种主要的肿瘤抑制基因,PinX1在乳腺癌中的作用及其分子机制仍不清楚。在本研究中,在3种乳腺癌细胞系中实现了PinX1的过表达,并在一种非致瘤性乳腺细胞系中进行了PinX1的敲低。观察了PinX1对细胞增殖和细胞周期的调控。还进行了基于微阵列的lncRNA和mRNA表达谱筛选。我们发现PinX1过表达的乳腺癌细胞生长速率降低,出现G0/G1期阻滞和S期抑制,而PinX1敲低的非致瘤性乳腺细胞生长速率升高,G0/G1期减少,S期速率增加。在PinX1过表达的MCF-7细胞和对照细胞之间,共鉴定出977个mRNA和631个lncRNA作为差异表达转录本。进一步分析确定这些mRNA参与了52条癌症相关通路和各种其他生物学过程。11个增强子样lncRNA和25个与其相邻mRNA对的lincRNA被鉴定为共调控转录本。我们的结果证实了PinX1作为乳腺癌细胞系中主要肿瘤抑制基因的作用,并为进一步研究PinX1在肿瘤发生中的分子机制提供了信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b77/3929369/430c05b275e5/BMRI2014-978984.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b77/3929369/d8a332999e43/BMRI2014-978984.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b77/3929369/bd5521834db3/BMRI2014-978984.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b77/3929369/430c05b275e5/BMRI2014-978984.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b77/3929369/d8a332999e43/BMRI2014-978984.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b77/3929369/bd5521834db3/BMRI2014-978984.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b77/3929369/430c05b275e5/BMRI2014-978984.003.jpg

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Posttranscriptional gene regulation by long noncoding RNA.长非编码 RNA 的转录后基因调控。
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