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中国回族人群12个X染色体短串联重复序列位点的多态性研究

Diversity study of 12 X-chromosomal STR loci in Hui ethnic from China.

作者信息

Meng Hao-Tian, Han Jun-Tao, Zhang Yu-Dang, Liu Wen-Juan, Wang Tian-Ju, Yan Jiang-Wei, Huang Jing-Feng, Du Wei-An, Guo Jian-Xin, Wang Hong-Dan, Zhang Yu-Hong, Zhou Ru-Hua, Zhu Bo-Feng, Wei Xing

机构信息

Xi'an Jiaotong University, Health Science Center, Xi'an, P. R. China***

出版信息

Electrophoresis. 2014 Jul;35(14):2001-7. doi: 10.1002/elps.201400045. Epub 2014 Jun 5.

Abstract

X-chromosomal STRs (X-STRs) have been used as complements of autosomal STR application in recent years. In this work, we present population genetic data of 12 X-STRs including DXS101, DXS10159, DXS10162, DXS10164, DXS6789, DXS7133, DXS7423, DXS7424, DXS8378, DXS981, GATA165B12, and GATA31E08 loci in a sample of 231 unrelated healthy individuals from the Hui ethnic group in Ningxia Hui Autonomous Region, China. Allelic frequencies of the 12 X-STR loci and haplotypic frequencies of the reported linkage groups (DXS7424-DXS101 and DXS10159-DXS10164-DXS10162) were investigated in the group, respectively. No STR loci showed significant deviations from the Hardy-Weinberg equilibriums and no linkage disequilibriums of pairwise loci were found after Bonferroni correction, respectively. A combined power of discrimination in female individuals was 0.999999999985 and that in male individuals was 0.99999967, respectively. The combined mean exclusion chance in deficiency cases, normal trios and duo cases were 0.999934, 0.995754, and 0.999796, respectively. Significant differences were observed from 0 to 8 loci, when making comparisons between the data of Hui ethnic group and previously reported data from other 16 populations. The results indicated the new panel of 12 X-STR loci might be useful for forensic science application.

摘要

近年来,X染色体短串联重复序列(X-STRs)已被用作常染色体STR应用的补充。在本研究中,我们展示了来自中国宁夏回族自治区231名无亲缘关系的健康个体样本中12个X-STRs的群体遗传数据,这些X-STRs包括DXS101、DXS10159、DXS10162、DXS10164、DXS6789、DXS7133、DXS7423、DXS7424、DXS8378、DXS981、GATA165B12和GATA31E08基因座。分别研究了该群体中12个X-STR基因座的等位基因频率以及报道的连锁群(DXS7424-DXS101和DXS10159-DXS10164-DXS10162)的单倍型频率。各STR基因座均未显示出显著偏离哈迪-温伯格平衡,经Bonferroni校正后,成对基因座之间也未发现连锁不平衡。女性个体的联合鉴别力为0.999999999985,男性个体的联合鉴别力为0.99999967。在缺失样本、正常三联体和二联体样本中的联合平均排除概率分别为0.999,934、0.995,754和0.999,796。当将回族群体的数据与之前报道的其他16个群体的数据进行比较时,在0至8个基因座之间观察到显著差异。结果表明,这12个X-STR基因座的新组合可能有助于法医学应用。

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