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引用本文的文献

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本文引用的文献

1
Methylophilus glucosoxydans sp. nov., a restricted facultative methylotroph from rice rhizosphere.甲基营养型氧化葡糖杆菌(Methylophilus glucosoxydans),一种来自水稻根际的严格兼性甲基营养菌。
Int J Syst Evol Microbiol. 2012 Jan;62(Pt 1):196-201. doi: 10.1099/ijs.0.024620-0. Epub 2011 Mar 4.
2
Methylophilus flavus sp. nov. and Methylophilus luteus sp. nov., aerobic, methylotrophic bacteria associated with plants.黄甲基杆菌新种和黄甲基单胞菌新种,好氧型、植物相关的甲基营养细菌。
Int J Syst Evol Microbiol. 2010 Nov;60(Pt 11):2623-2628. doi: 10.1099/ijs.0.019455-0. Epub 2009 Dec 18.
3
Methylophilus rhizosphaerae sp. nov., a restricted facultative methylotroph isolated from rice rhizosphere soil.根际嗜甲基菌新种,一种从水稻根际土壤中分离出的受限兼性甲基营养菌。
Int J Syst Evol Microbiol. 2009 Nov;59(Pt 11):2904-8. doi: 10.1099/ijs.0.009811-0. Epub 2009 Jul 23.
4
MetaGeneAnnotator: detecting species-specific patterns of ribosomal binding site for precise gene prediction in anonymous prokaryotic and phage genomes.MetaGeneAnnotator:检测核糖体结合位点的物种特异性模式,以在未知原核生物和噬菌体基因组中进行精确的基因预测。
DNA Res. 2008 Dec;15(6):387-96. doi: 10.1093/dnares/dsn027. Epub 2008 Oct 21.
5
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.RNAmmer:核糖体RNA基因的一致性快速注释
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
6
Methylophilus quaylei sp. nov., a new aerobic obligately methylotrophic bacterium.奎氏嗜甲基菌新种,一种新的需氧专性甲基营养细菌。
Syst Appl Microbiol. 2005 Jun;28(4):303-9. doi: 10.1016/j.syapm.2005.02.002.
7
Molecular phylogeny of type II methane-oxidizing bacteria isolated from various environments.从不同环境中分离出的II型甲烷氧化细菌的分子系统发育
Microbiology (Reading). 2002 Sep;148(Pt 9):2831-2846. doi: 10.1099/00221287-148-9-2831.
8
Effect of copper speciation on whole-cell soluble methane monooxygenase activity in Methylosinus trichosporium OB3b.铜形态对 Trichosporium 甲基孢囊菌 OB3b 全细胞可溶性甲烷单加氧酶活性的影响。
Appl Environ Microbiol. 2000 Apr;66(4):1730-3. doi: 10.1128/AEM.66.4.1730-1733.2000.
9
Acidophilic methanotrophic communities from Sphagnum peat bogs.来自泥炭藓泥炭沼泽的嗜酸性甲烷营养群落。
Appl Environ Microbiol. 1998 Mar;64(3):922-9. doi: 10.1128/AEM.64.3.922-929.1998.
10
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.tRNAscan-SE:用于改进基因组序列中转运RNA基因检测的程序。
Nucleic Acids Res. 1997 Mar 1;25(5):955-64. doi: 10.1093/nar/25.5.955.

从日本北海道池塘沉积物中分离出的利用甲醇的嗜甲基菌属菌株OH31的基因组序列草图

Draft Genome Sequence of Methanol-Utilizing Methylophilus sp. Strain OH31, Isolated from Pond Sediment in Hokkaido, Japan.

作者信息

Kugo Takahiro, Kitagawa Wataru, Shimomura Yoshinori, Yamagishi Takuya, Tanaka Michiko, Sone Teruo, Asano Kozo, Kamagata Yoichi

机构信息

Graduate School of Agriculture, Hokkaido University, Sapporo, Japan.

出版信息

Genome Announc. 2014 Apr 10;2(2):e00274-14. doi: 10.1128/genomeA.00274-14.

DOI:10.1128/genomeA.00274-14
PMID:24723716
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3983305/
Abstract

Methylophilus sp. strain OH31 was isolated from the sediment of the Ohno pond at Hokkaido University. Strain OH31 utilizes methanol as its energy source. Here, we present the draft genome sequence of Methylophilus sp. strain OH31.

摘要

嗜甲基菌属菌株OH31是从北海道大学大野池塘的沉积物中分离出来的。OH31菌株利用甲醇作为其能量来源。在此,我们展示嗜甲基菌属菌株OH31的基因组草图序列。