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避免DNA甲基化。一种病毒编码的甲基化酶抑制剂及病毒基因组中甲基化酶识别位点反选择的证据。

Avoidance of DNA methylation. A virus-encoded methylase inhibitor and evidence for counterselection of methylase recognition sites in viral genomes.

作者信息

Krüger D H, Schroeder C, Santibanez-Koref M, Reuter M

机构信息

Institute of Medical Virology, Humboldt University School of Medicine, Charité, Berlin, German Democratic Republic.

出版信息

Cell Biophys. 1989 Aug-Oct;15(1-2):87-95. doi: 10.1007/BF02991582.

DOI:10.1007/BF02991582
PMID:2476230
Abstract

The ocr+ gene of bacterial virus T7 codes for the first protein recognized to inhibit a specific group of DNA methylases. The recognition sequences of several other DNA methylases, not susceptible to Ocr inhibition, are significantly suppressed in the virus genome. The bacterial virus T3 encodes an Ado-Met hydrolase, destroying the methyl donor and causing T3 DNA to be totally unmethylated. These observations could stimulate analogous investigations into the regulation of DNA methylation patterns of eukaryotic viruses and cells. For instance, an underrepresentation of methylation sites (5'-CG) is also true for animal DNA viruses. Moreover, we were able to disclose some novel properties of DNA restriction-modification enzymes concerning the protection of DNA recognition sequences in which only one strand can be methylated (e.g., type III enzyme EcoP15) and the primary resistance of (unmethylated) DNA recognition sites towards type II restriction endonuclease EcoRII.

摘要

细菌病毒T7的ocr+基因编码了首个被确认可抑制特定DNA甲基化酶组的蛋白质。病毒基因组中,几种不受Ocr抑制的其他DNA甲基化酶的识别序列受到显著抑制。细菌病毒T3编码一种腺苷甲硫氨酸水解酶,该酶会破坏甲基供体,使T3 DNA完全未甲基化。这些观察结果可能会激发对真核病毒和细胞DNA甲基化模式调控的类似研究。例如,动物DNA病毒的甲基化位点(5'-CG)也存在低表达情况。此外,我们能够揭示DNA限制修饰酶的一些新特性,这些特性涉及对DNA识别序列的保护,其中只有一条链可以被甲基化(例如III型酶EcoP15),以及(未甲基化的)DNA识别位点对II型限制性内切酶EcoRII的主要抗性。

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Avoidance of DNA methylation. A virus-encoded methylase inhibitor and evidence for counterselection of methylase recognition sites in viral genomes.避免DNA甲基化。一种病毒编码的甲基化酶抑制剂及病毒基因组中甲基化酶识别位点反选择的证据。
Cell Biophys. 1989 Aug-Oct;15(1-2):87-95. doi: 10.1007/BF02991582.
2
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Eur J Biochem. 1985 Jul 15;150(2):323-30. doi: 10.1111/j.1432-1033.1985.tb09024.x.
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Use of bacterial virus T7 as a tool for the study of DNA methylation.使用细菌病毒T7作为研究DNA甲基化的工具。
Gene. 1988 Dec 25;74(1):85-7. doi: 10.1016/0378-1119(88)90258-2.
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[DNA methylation in T3 and T7 phages by DNA-adenine methylases of various types and methylase EcoK ocR+ by protein].
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Oligonucleotide duplexes containing CC(A/T)GG stimulate cleavage of refractory DNA by restriction endonuclease EcoRII.含有CC(A/T)GG的寡核苷酸双链体可刺激限制性内切酶EcoRII切割难切割的DNA。
FEBS Lett. 1989 Mar 13;245(1-2):141-4. doi: 10.1016/0014-5793(89)80208-x.

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本文引用的文献

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Complete nucleotide sequence of bacteriophage T7 DNA and the locations of T7 genetic elements.噬菌体T7 DNA的完整核苷酸序列及T7遗传元件的定位
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DNA methylation of T3 virus ocr+ and ocr- strains in Escherichia coli cells harbouring the EcoK DNA host specificity system.
Biomed Biochim Acta. 1984;43(3):K1-5.
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Bacteriophage survival: multiple mechanisms for avoiding the deoxyribonucleic acid restriction systems of their hosts.噬菌体的存活:避免宿主脱氧核糖核酸限制系统的多种机制。
乙型肝炎病毒何时与长链非编码RNA相遇?
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Methylation Microarray Studies Highlight PDGFA Expression as a Factor in Biliary Atresia.甲基化微阵列研究强调血小板衍生生长因子A(PDGFA)表达是胆道闭锁的一个因素。
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The role of epigenetic dysregulation in the epidemic of allergic disease.表观遗传失调在过敏性疾病流行中的作用。
Clin Epigenetics. 2011 Aug;2(2):223-232. doi: 10.1007/s13148-011-0028-4. Epub 2011 Apr 13.
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DNA hypomethylation causes bile duct defects in zebrafish and is a distinguishing feature of infantile biliary atresia.DNA 低甲基化导致斑马鱼胆管缺陷,是婴儿胆道闭锁的一个显著特征。
Hepatology. 2011 Mar;53(3):905-14. doi: 10.1002/hep.24106. Epub 2011 Feb 11.
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Biology of DNA restriction.DNA限制生物学
Microbiol Rev. 1993 Jun;57(2):434-50. doi: 10.1128/mr.57.2.434-450.1993.
Microbiol Rev. 1983 Sep;47(3):345-60. doi: 10.1128/mr.47.3.345-360.1983.
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Microbiol Rev. 1981 Mar;45(1):9-51. doi: 10.1128/mr.45.1.9-51.1981.
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Proc Natl Acad Sci U S A. 1984 Jun;81(11):3278-82. doi: 10.1073/pnas.81.11.3278.
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DNA methylation of bacterial viruses T3 and T7 by different DNA methylases in Escherichia coli K12 cells.大肠杆菌K12细胞中不同DNA甲基化酶对细菌病毒T3和T7的DNA甲基化作用。
Eur J Biochem. 1985 Jul 15;150(2):323-30. doi: 10.1111/j.1432-1033.1985.tb09024.x.
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