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纳米毒性的大规模分子模拟。

Large scale molecular simulations of nanotoxicity.

机构信息

Computational Biology Center, IBM Thomas J. Watson Research Center, Yorktown Heights, NY, USA.

出版信息

Wiley Interdiscip Rev Syst Biol Med. 2014 Jul-Aug;6(4):329-43. doi: 10.1002/wsbm.1271. Epub 2014 Jun 4.

DOI:10.1002/wsbm.1271
PMID:24894909
Abstract

The widespread use of nanomaterials in biomedical applications has been accompanied by an increasing interest in understanding their interactions with tissues, cells, and biomolecules, and in particular, on how they might affect the integrity of cell membranes and proteins. In this mini-review, we present a summary of some of the recent studies on this important subject, especially from the point of view of large scale molecular simulations. The carbon-based nanomaterials and noble metal nanoparticles are the main focus, with additional discussions on quantum dots and other nanoparticles as well. The driving forces for adsorption of fullerenes, carbon nanotubes, and graphene nanosheets onto proteins or cell membranes are found to be mainly hydrophobic interactions and the so-called π-π stacking (between aromatic rings), while for the noble metal nanoparticles the long-range electrostatic interactions play a bigger role. More interestingly, there are also growing evidences showing that nanotoxicity can have implications in de novo design of nanomedicine. For example, the endohedral metallofullerenol Gd@C₈₂(OH)₂₂ is shown to inhibit tumor growth and metastasis by inhibiting enzyme MMP-9, and graphene is illustrated to disrupt bacteria cell membranes by insertion/cutting as well as destructive extraction of lipid molecules. These recent findings have provided a better understanding of nanotoxicity at the molecular level and also suggested therapeutic potential by using the cytotoxicity of nanoparticles against cancer or bacteria cells.

摘要

纳米材料在生物医学应用中的广泛使用,引起了人们对其与组织、细胞和生物分子相互作用的极大兴趣,特别是对它们如何影响细胞膜和蛋白质完整性的关注。在这篇迷你综述中,我们总结了一些关于这个重要主题的最新研究,特别是从大规模分子模拟的角度来看。主要关注碳基纳米材料和贵金属纳米粒子,同时也讨论了量子点和其他纳米粒子。研究发现,富勒烯、碳纳米管和石墨烯纳米片吸附到蛋白质或细胞膜上的驱动力主要是疏水相互作用和所谓的π-π 堆积(芳环之间),而对于贵金属纳米粒子,长程静电相互作用则起着更大的作用。更有趣的是,越来越多的证据表明,纳米毒性可能对纳米医学的从头设计产生影响。例如,内包金属富勒醇 Gd@C82(OH)22 被证明通过抑制酶 MMP-9 来抑制肿瘤生长和转移,石墨烯通过插入/切割以及破坏性提取脂质分子来破坏细菌细胞膜。这些最新发现从分子水平上更好地理解了纳米毒性,并通过利用纳米颗粒对癌细胞或细菌的细胞毒性来暗示了治疗潜力。

相似文献

1
Large scale molecular simulations of nanotoxicity.纳米毒性的大规模分子模拟。
Wiley Interdiscip Rev Syst Biol Med. 2014 Jul-Aug;6(4):329-43. doi: 10.1002/wsbm.1271. Epub 2014 Jun 4.
2
Interactions between proteins and carbon-based nanoparticles: exploring the origin of nanotoxicity at the molecular level.蛋白质与基于碳的纳米颗粒之间的相互作用:在分子水平探索纳米毒性的起源。
Small. 2013 May 27;9(9-10):1546-56. doi: 10.1002/smll.201201381. Epub 2012 Oct 5.
3
Cytotoxicity of graphene: recent advances and future perspective.石墨烯的细胞毒性:最新进展与未来展望
Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2014 Sep-Oct;6(5):452-74. doi: 10.1002/wnan.1277. Epub 2014 Jun 23.
4
Reduced Cytotoxicity of Graphene Nanosheets Mediated by Blood-Protein Coating.血蛋白涂层介导的石墨烯纳米片的细胞毒性降低。
ACS Nano. 2015 Jun 23;9(6):5713-24. doi: 10.1021/nn5066606. Epub 2015 Jun 9.
5
Fullerenes, carbon nanotubes, and graphene for molecular electronics.用于分子电子学的富勒烯、碳纳米管和石墨烯。
Top Curr Chem. 2012;312:127-74. doi: 10.1007/128_2011_176.
6
Low-toxic and safe nanomaterials by surface-chemical design, carbon nanotubes, fullerenes, metallofullerenes, and graphenes.通过表面化学设计实现低毒和安全的纳米材料,包括碳纳米管、富勒烯、金属富勒烯和石墨烯。
Nanoscale. 2011 Feb;3(2):362-82. doi: 10.1039/c0nr00647e. Epub 2010 Dec 14.
7
Interfacing proteins with graphitic nanomaterials: from spontaneous attraction to tailored assemblies.将蛋白质与石墨纳米材料连接:从自发吸引到定制组装。
Chem Soc Rev. 2015 Oct 7;44(19):6916-53. doi: 10.1039/c5cs00190k.
8
Toxicity and efficacy of carbon nanotubes and graphene: the utility of carbon-based nanoparticles in nanomedicine.碳纳米管与石墨烯的毒性及功效:碳基纳米颗粒在纳米医学中的应用
Drug Metab Rev. 2014 May;46(2):232-46. doi: 10.3109/03602532.2014.883406. Epub 2014 Feb 10.
9
Molecular mechanism of pancreatic tumor metastasis inhibition by Gd@C82(OH)22 and its implication for de novo design of nanomedicine.Gd@C82(OH)22 抑制胰腺肿瘤转移的分子机制及其对新型纳米药物设计的启示。
Proc Natl Acad Sci U S A. 2012 Sep 18;109(38):15431-6. doi: 10.1073/pnas.1204600109. Epub 2012 Sep 4.
10
Recent applications of carbon nanomaterials in fluorescence biosensing and bioimaging.碳纳米材料在荧光生物传感与生物成像中的最新应用。
Chem Commun (Camb). 2015 Jul 21;51(57):11346-58. doi: 10.1039/c5cc02887f.

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2
Screening 2D Materials for Their Nanotoxicity toward Nucleic Acids and Proteins: An In Silico Outlook.二维材料对核酸和蛋白质的纳米毒性筛选:计算机模拟展望
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3
In Silico Simulation of Impacts of Metal Nano-Oxides on Cell Viability in THP-1 Cells Based on the Correlation Weights of the Fragments of Molecular Structures and Codes of Experimental Conditions Represented by Means of Quasi-SMILES.
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Carbon Nanodots from an In Silico Perspective.从计算机模拟角度看碳纳米点。
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6
Effect of dopamine-functionalization, charge and pH on protein corona formation around TiO nanoparticles.多巴胺功能化、荷电和 pH 值对 TiO2 纳米颗粒周围蛋白质冠形成的影响。
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Nanomaterials (Basel). 2022 Feb 15;12(4):650. doi: 10.3390/nano12040650.
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