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来自异构数据集的大分子及其复合物的构象

Conformations of macromolecules and their complexes from heterogeneous datasets.

作者信息

Schwander P, Fung R, Ourmazd A

机构信息

Department of Physics, University of Wisconsin Milwaukee, 1900 E. Kenwood Boulevard, Milwaukee, WI 53211, USA.

Department of Physics, University of Wisconsin Milwaukee, 1900 E. Kenwood Boulevard, Milwaukee, WI 53211, USA

出版信息

Philos Trans R Soc Lond B Biol Sci. 2014 Jul 17;369(1647):20130567. doi: 10.1098/rstb.2013.0567.

Abstract

We describe a new generation of algorithms capable of mapping the structure and conformations of macromolecules and their complexes from large ensembles of heterogeneous snapshots, and demonstrate the feasibility of determining both discrete and continuous macromolecular conformational spectra. These algorithms naturally incorporate conformational heterogeneity without resort to sorting and classification, or prior knowledge of the type of heterogeneity present. They are applicable to single-particle diffraction and image datasets produced by X-ray lasers and cryo-electron microscopy, respectively, and particularly suitable for systems not easily amenable to purification or crystallization.

摘要

我们描述了新一代算法,这些算法能够从大量异构快照集合中绘制大分子及其复合物的结构和构象,并证明了确定离散和连续大分子构象谱的可行性。这些算法自然地纳入了构象异质性,无需进行分类和排序,也无需事先了解存在的异质性类型。它们分别适用于由X射线激光和冷冻电子显微镜产生的单粒子衍射和图像数据集,特别适用于不易纯化或结晶的系统。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d82a/4052876/dc3c183092dd/rstb20130567-g1.jpg

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