Shimizu Kazuyuki
Kyushu Institute of Technology, Fukuoka, Iizuka 820-8502, Japan.
Metabolites. 2013 Dec 30;4(1):1-35. doi: 10.3390/metabo4010001.
An overview was made to understand the regulation system of a bacterial cell such as Escherichia coli in response to nutrient limitation such as carbon, nitrogen, phosphate, sulfur, ion sources, and environmental stresses such as oxidative stress, acid shock, heat shock, and solvent stresses. It is quite important to understand how the cell detects environmental signals, integrate such information, and how the cell system is regulated. As for catabolite regulation, F1,6B P (FDP), PEP, and PYR play important roles in enzyme level regulation together with transcriptional regulation by such transcription factors as Cra, Fis, CsrA, and cAMP-Crp. αKG plays an important role in the coordinated control between carbon (C)- and nitrogen (N)-limitations, where αKG inhibits enzyme I (EI) of phosphotransferase system (PTS), thus regulating the glucose uptake rate in accordance with N level. As such, multiple regulation systems are co-ordinated for the cell synthesis and energy generation against nutrient limitations and environmental stresses. As for oxidative stress, the TCA cycle both generates and scavenges the reactive oxygen species (ROSs), where NADPH produced at ICDH and the oxidative pentose phosphate pathways play an important role in coping with oxidative stress. Solvent resistant mechanism was also considered for the stresses caused by biofuels and biochemicals production in the cell.
本文对细菌细胞(如大肠杆菌)响应碳、氮、磷、硫、离子源等营养限制以及氧化应激、酸休克、热休克和溶剂应激等环境压力的调节系统进行了综述。了解细胞如何检测环境信号、整合这些信息以及细胞系统如何被调节非常重要。对于分解代谢调节,F1,6B P(FDP)、PEP和PYR在酶水平调节中发挥重要作用,同时诸如Cra、Fis、CsrA和cAMP-Crp等转录因子也参与转录调节。αKG在碳(C)和氮(N)限制之间的协调控制中起重要作用,其中αKG抑制磷酸转移酶系统(PTS)的酶I(EI),从而根据氮水平调节葡萄糖摄取率。因此,针对营养限制和环境压力,多种调节系统协同作用以实现细胞合成和能量产生。对于氧化应激,三羧酸循环既能产生又能清除活性氧(ROS),其中在异柠檬酸脱氢酶(ICDH)和氧化戊糖磷酸途径产生的NADPH在应对氧化应激中起重要作用。还考虑了细胞中生物燃料和生化物质生产所引起的应激的耐溶剂机制。