Shimizu Kazuyuki
Kyushu Institute of Technology, Fukuoka, Iizuka 820-8502, Japan ; Institute of Advanced Bioscience, Keio University, Yamagata, Tsuruoka 997-0017, Japan.
ISRN Biochem. 2013 Feb 18;2013:645983. doi: 10.1155/2013/645983. eCollection 2013.
It is quite important to understand the overall metabolic regulation mechanism of bacterial cells such as Escherichia coli from both science (such as biochemistry) and engineering (such as metabolic engineering) points of view. Here, an attempt was made to clarify the overall metabolic regulation mechanism by focusing on the roles of global regulators which detect the culture or growth condition and manipulate a set of metabolic pathways by modulating the related gene expressions. For this, it was considered how the cell responds to a variety of culture environments such as carbon (catabolite regulation), nitrogen, and phosphate limitations, as well as the effects of oxygen level, pH (acid shock), temperature (heat shock), and nutrient starvation.
从科学(如生物化学)和工程(如代谢工程)的角度理解诸如大肠杆菌等细菌细胞的整体代谢调节机制是非常重要的。在此,我们试图通过关注全局调节因子的作用来阐明整体代谢调节机制,这些全局调节因子能够检测培养或生长条件,并通过调节相关基因表达来操纵一组代谢途径。为此,我们考虑了细胞如何响应各种培养环境,如碳(分解代谢物调节)、氮和磷限制,以及氧水平、pH(酸休克)、温度(热休克)和营养饥饿的影响。