Reichhardt Courtney, Cegelski Lynette
Department of Chemistry, Stanford University, CA 94305, United States.
Mol Phys. 2014 Apr 3;112(7):887-894. doi: 10.1080/00268976.2013.837983.
Bacteria associate with surfaces and one another by elaborating an extracellular matrix to encapsulate cells, creating communities termed biofilms. Biofilms are beneficial in some ecological niches, but also contribute to the pathogenesis of serious and chronic infectious diseases. New approaches and quantitative measurements are needed to define the composition and architecture of bacterial biofilms to help drive the development of strategies to interfere with biofilm assembly. Solid-state NMR is uniquely suited to the examination of insoluble and complex macromolecular and whole-cell systems. This article highlights three examples that implement solid-state NMR to deliver insights into bacterial biofilm composition and changes in cell-wall composition as cells transition to the biofilm lifestyle. Most recently, solid-state NMR measurements provided a total accounting of the protein and polysaccharide components in the extracellular matrix of an biofilm and transform our qualitative descriptions of matrix composition into chemical parameters that permit quantitative comparisons among samples. We present additional data for whole biofilm samples (cells plus the extracellular matrix) that complement matrix-only analyses. The study of bacterial biofilms by solid-state NMR is an exciting avenue ripe with many opportunities and we close the article by articulating some outstanding questions and future directions in this area.
细菌通过分泌细胞外基质来包裹细胞,从而与表面及彼此相互关联,形成被称为生物膜的群落。生物膜在某些生态位中有益,但也会导致严重和慢性传染病的发病机制。需要新的方法和定量测量来定义细菌生物膜的组成和结构,以帮助推动干扰生物膜组装策略的发展。固态核磁共振特别适合于检查不溶性和复杂的大分子及全细胞系统。本文重点介绍了三个实施固态核磁共振的例子,以深入了解细菌生物膜的组成以及细胞转变为生物膜生活方式时细胞壁组成的变化。最近,固态核磁共振测量全面分析了生物膜细胞外基质中的蛋白质和多糖成分,并将我们对基质组成的定性描述转化为化学参数,从而能够对样品进行定量比较。我们展示了全生物膜样品(细胞加细胞外基质)的额外数据,这些数据补充了仅对基质的分析。通过固态核磁共振研究细菌生物膜是一个充满许多机会的令人兴奋的途径,我们在文章结尾阐述了该领域一些悬而未决的问题和未来方向。