Yu Hai, Lau Kam, Li Yanhong, Sugiarto Go, Chen Xi
Department of Chemistry, University of California-Davis, One Shields Avenue, Davis, CA 95616 USA.
Curr Protoc Chem Biol. 2012 Sep 1;4:233-247. doi: 10.1002/9780470559277.ch110277.
L-Fucose has been found abundantly in human milk oligosaccharides, bacterial lipopolysaccharides, glycolipids, and many - and -linked glycans produced by mammalian cells. Fucose-containing carbohydrates have important biological functions. Alterations in the expression of fucosylated oligosaccharides have been observed in several pathological processes such as cancer and atherosclerosis. Chemical formation of fucosidic bonds is challenging due to its acid lability. Enzymatic construction of fucosidic bonds by fucosyltransferases is highly efficient and selective but requires the expensive sugar nucleotide donor guanosine 5'- diphosphate-L-fucose (GDP-Fuc). Here, we describe a protocol for applying a one-pot three-enzyme system in synthesizing structurally defined fucose-containing oligosaccharides from free L-fucose. In this system, GDP-Fuc is generated from L-fucose, adenosine 5'-triphosphate (ATP), and guanosine 5'-triphosphate (GTP) by a bifunctional L-fucokinase/GDP-fucose pyrophosphorylase (FKP). An inorganic pyrophosphatase (PpA) is used to degrade the by-product pyrophosphate (PPi) to drive the reaction towards the formation of GDP-Fuc. generated GDP-Fuc is then used by a suitable fucosyltransferase for the formation of fucosides. The three-enzyme reactions are carried out in one pot without the need for high cost sugar nucleotide or isolation of intermediates. The time for the synthesis is 4-24 hours. Purification and characterization of products can be completed in 2-3 days.
L-岩藻糖在人乳寡糖、细菌脂多糖、糖脂以及哺乳动物细胞产生的许多N-连接聚糖中大量存在。含岩藻糖的碳水化合物具有重要的生物学功能。在癌症和动脉粥样硬化等几种病理过程中,已观察到岩藻糖基化寡糖表达的改变。由于其酸不稳定性,岩藻糖苷键的化学形成具有挑战性。岩藻糖基转移酶对岩藻糖苷键的酶促构建高效且具有选择性,但需要昂贵的糖核苷酸供体5'-二磷酸-L-岩藻糖鸟苷(GDP-Fuc)。在此,我们描述了一种在从游离L-岩藻糖合成结构明确的含岩藻糖寡糖中应用一锅三酶系统的方案。在该系统中,双功能L-岩藻糖激酶/GDP-岩藻糖焦磷酸化酶(FKP)由L-岩藻糖、5'-三磷酸腺苷(ATP)和5'-三磷酸鸟苷(GTP)生成GDP-Fuc。无机焦磷酸酶(PpA)用于降解副产物焦磷酸(PPi)以驱动反应朝着GDP-Fuc的形成方向进行。然后,合适的岩藻糖基转移酶使用生成的GDP-Fuc形成岩藻糖苷。三酶反应在一锅法中进行,无需使用高成本的糖核苷酸或分离中间体。合成时间为4至24小时。产物的纯化和表征可在2至3天内完成。