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与攻击相关行为有关的基因和基因网络。

Genes and gene networks implicated in aggression related behaviour.

作者信息

Malki Karim, Pain Oliver, Du Rietz Ebba, Tosto Maria Grazia, Paya-Cano Jose, Sandnabba Kenneth N, de Boer Sietse, Schalkwyk Leonard C, Sluyter Frans

机构信息

King's College London, MRC Social, Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, London, UK,

出版信息

Neurogenetics. 2014 Oct;15(4):255-66. doi: 10.1007/s10048-014-0417-x. Epub 2014 Aug 22.

Abstract

Aggressive behaviour is a major cause of mortality and morbidity. Despite of moderate heritability estimates, progress in identifying the genetic factors underlying aggressive behaviour has been limited. There are currently three genetic mouse models of high and low aggression created using selective breeding. This is the first study to offer a global transcriptomic characterization of the prefrontal cortex across all three genetic mouse models of aggression. A systems biology approach has been applied to transcriptomic data across the three pairs of selected inbred mouse strains (Turku Aggressive (TA) and Turku Non-Aggressive (TNA), Short Attack Latency (SAL) and Long Attack Latency (LAL) mice and North Carolina Aggressive (NC900) and North Carolina Non-Aggressive (NC100)), providing novel insight into the neurobiological mechanisms and genetics underlying aggression. First, weighted gene co-expression network analysis (WGCNA) was performed to identify modules of highly correlated genes associated with aggression. Probe sets belonging to gene modules uncovered by WGCNA were carried forward for network analysis using ingenuity pathway analysis (IPA). The RankProd non-parametric algorithm was then used to statistically evaluate expression differences across the genes belonging to modules significantly associated with aggression. IPA uncovered two pathways, involving NF-kB and MAPKs. The secondary RankProd analysis yielded 14 differentially expressed genes, some of which have previously been implicated in pathways associated with aggressive behaviour, such as Adrbk2. The results highlighted plausible candidate genes and gene networks implicated in aggression-related behaviour.

摘要

攻击性行为是导致死亡和发病的主要原因。尽管有中等程度的遗传度估计,但在确定攻击性行为背后的遗传因素方面进展有限。目前有三种通过选择性育种创建的高攻击性和低攻击性的基因小鼠模型。这是第一项对所有三种攻击性基因小鼠模型的前额叶皮质进行全基因组转录组特征分析的研究。一种系统生物学方法已应用于三对选定的近交小鼠品系(图尔库攻击性(TA)和图尔库非攻击性(TNA)、短攻击潜伏期(SAL)和长攻击潜伏期(LAL)小鼠以及北卡罗来纳攻击性(NC900)和北卡罗来纳非攻击性(NC100))的转录组数据,为攻击性行为背后的神经生物学机制和遗传学提供了新的见解。首先,进行加权基因共表达网络分析(WGCNA)以识别与攻击性行为相关的高度相关基因模块。属于WGCNA发现的基因模块的探针集被用于使用 Ingenuity 通路分析(IPA)进行网络分析。然后使用RankProd非参数算法对属于与攻击性行为显著相关模块的基因的表达差异进行统计评估。IPA发现了两条通路,涉及NF-kB和MAPKs。二次RankProd分析产生了14个差异表达基因,其中一些基因先前已涉及与攻击性行为相关的通路,如Adrbk2。结果突出了与攻击性行为相关的合理候选基因和基因网络。

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