人类鼻病毒的分类与进化
Classification and evolution of human rhinoviruses.
作者信息
Palmenberg Ann C, Gern James E
机构信息
Institute for Molecular Virology, University of Wisconsin-Madison, 1525 Linden Drive, Madison, WI, 53706, USA,
出版信息
Methods Mol Biol. 2015;1221:1-10. doi: 10.1007/978-1-4939-1571-2_1.
Abstract
The historical classification of human rhinoviruses (RV) by serotyping has been replaced by a logical system of comparative sequencing. Given that strains must diverge within their capsid sequenced by a reasonable degree (>12-13 % pairwise base identities) before becoming immunologically distinct, the new nomenclature system makes allowances for the addition of new, future types, without compromising historical designations. Currently, three species, the RV-A, RV-B, and RV-C, are recognized. Of these, the RV-C, discovered in 2006, are the most unusual in terms of capsid structure, receptor use, and association with severe disease in children.
摘要
人类鼻病毒（RV）基于血清型的历史分类已被一个合理的比较测序系统所取代。鉴于毒株在其衣壳序列内必须有合理程度的差异（成对碱基同一性>12 - 13%）才会在免疫上变得不同，新的命名系统允许添加新的、未来的类型，同时不影响历史命名。目前，已识别出三个种，即RV - A、RV - B和RV - C。其中，2006年发现的RV - C在衣壳结构、受体使用以及与儿童严重疾病的关联方面最为特殊。
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本文引用的文献
1
Modeling of the human rhinovirus C capsid suggests a novel topography with insights on receptor preference and immunogenicity.
Virology. 2014 Jan 5;448:176-84. doi: 10.1016/j.virol.2013.10.006. Epub 2013 Oct 25.
2
Modeling of the human rhinovirus C capsid suggests possible causes for antiviral drug resistance.
Virology. 2014 Jan 5;448:82-90. doi: 10.1016/j.virol.2013.10.004. Epub 2013 Oct 20.
3
Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types.
J Gen Virol. 2013 Aug;94(Pt 8):1791-1806. doi: 10.1099/vir.0.053686-0. Epub 2013 May 15.
4
Biological characteristics and propagation of human rhinovirus-C in differentiated sinus epithelial cells.
Virology. 2013 Feb 5;436(1):143-9. doi: 10.1016/j.virol.2012.11.002. Epub 2012 Nov 27.
5
Infection and propagation of human rhinovirus C in human airway epithelial cells.
J Virol. 2012 Dec;86(24):13524-32. doi: 10.1128/JVI.02094-12. Epub 2012 Oct 3.
6
Molecular modeling, organ culture and reverse genetics for a newly identified human rhinovirus C.
Nat Med. 2011 May;17(5):627-32. doi: 10.1038/nm.2358. Epub 2011 Apr 10.
7
Analysis of genetic diversity and sites of recombination in human rhinovirus species C.
J Virol. 2010 Oct;84(19):10297-310. doi: 10.1128/JVI.00962-10. Epub 2010 Jul 28.
8
Proposals for the classification of human rhinovirus species C into genotypically assigned types.
J Gen Virol. 2010 Oct;91(Pt 10):2409-19. doi: 10.1099/vir.0.023994-0. Epub 2010 Jul 7.
9
Analysis of the complete genome sequences of human rhinovirus.
J Allergy Clin Immunol. 2010 Jun;125(6):1190-9; quiz 1200-1. doi: 10.1016/j.jaci.2010.04.010. Epub 2010 May 14.
10
Full-genome sequence and analysis of a novel human rhinovirus strain within a divergent HRV-A clade.
Arch Virol. 2010;155(1):83-7. doi: 10.1007/s00705-009-0549-8. Epub 2009 Nov 20.
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