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人参土壤岩生菌(Epilithonimonas ginsengisoli),从人参田土壤中分离得到。

Epilithonimonas ginsengisoli sp. nov., isolated from soil of a ginseng field.

机构信息

Department of Oriental Medicinal Material and Processing, College of Life Science, Kyung-Hee University, Seocheon-dong, Giheung-gu, Yongin-si, Gyeonggi-do 446-701, Republic of Korea.

Graduate school of Biotechnology, Ginseng Genetic Resource Bank, College of life science, Kyung Hee University, Yongin, 446-701, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2015 Jan;65(Pt 1):122-128. doi: 10.1099/ijs.0.065466-0. Epub 2014 Oct 8.

Abstract

A novel Gram-staining-negative, rod-shaped bacterium, designated DCY78(T), was isolated from soil of a ginseng field in Yeon-cheon province (38° 04' 00″ N 126° 57' 00″ E), Republic of Korea. The phylogenetic analysis based on 16S rRNA gene sequences showed that strain DCY78(T) belonged to the genus Epilithonimonas and was most closely related to Epilithonimonas lactis DSM 19921(T) (98.5 % sequence similarity) and Epilithonimonas tenax DSM 16811(T) (97.8 %). Growth occurred at 10-30 °C with an optimum temperature of 28 °C. The pH range for growth was pH 5.5-8.0. The major polar lipids were found to be phosphatidylethanolamine three unidentified amino lipids and one unidentified polar lipid. The only predominant quinone was MK-6. The major polyamines were sym-homospermidine and spermidine. The major fatty acids were summed feature 3 (comprising C16 : 1ω6c and/or C16 : 1ω7c), iso-C15 : 0 and iso-C17 : 0 3-OH. The DNA G+C content was 37.9 mol%. On the basis of the phenotypic and genotypic analysis, the isolate is classified as representative of a novel species in the genus Epilithonimonas, for which the name Epilithonimonas ginsengisoli is proposed. The type strain is DCY78(T) ( = KCTC 32174(T) = JCM 19896(T)).

摘要

一株新型革兰氏阴性、杆状细菌,被命名为 DCY78(T),是从韩国江原道元山市人参田的土壤中分离得到的。基于 16S rRNA 基因序列的系统发育分析表明,菌株 DCY78(T)属于 Epilithonimonas 属,与 Epilithonimonas lactis DSM 19921(T)(98.5%序列相似性)和 Epilithonimonas tenax DSM 16811(T)(97.8%序列相似性)最为密切相关。该菌在 10-30°C 下生长,最适温度为 28°C。生长的 pH 值范围为 pH5.5-8.0。主要极性脂类为磷脂酰乙醇胺、三种未鉴定的氨基酸脂类和一种未鉴定的极性脂类。唯一主要的醌类为 MK-6。主要多胺为 sym-高亚精胺和亚精胺。主要脂肪酸为 sum 特征 3(包括 C16:1ω6c 和/或 C16:1ω7c)、iso-C15:0 和 iso-C17:0 3-OH。DNA G+C 含量为 37.9mol%。基于表型和基因型分析,该分离株被分类为 Epilithonimonas 属的一个新型种的代表,命名为人参附着 Epilithonimonas ginsengisoli。模式菌株为 DCY78(T)(=KCTC 32174(T)=JCM 19896(T))。

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