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京畿河生菌新种(Fluviicola kyonggii sp. nov.),一种从森林土壤中分离出的细菌及对河生菌属的修订描述

Fluviicola kyonggii sp. nov., a bacterium isolated from forest soil and emended description of the genus Fluviicola.

作者信息

Dahal Ram Hari, Kim Jaisoo

机构信息

Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Gyeonggi-Do 16227, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2018 Jun;68(6):1885-1889. doi: 10.1099/ijsem.0.002759. Epub 2018 Apr 12.

Abstract

A novel bacterium, designated strain CA-1, was isolated from forest soil in Kyonggi University. Cells were strictly aerobic, Gram-stain-negative, catalase-positive, oxidase-negative, non-motile, non-spore-forming, rod-shaped and red-orange-pigmented. Strain CA-1 hydrolysed casein and DNA. It was able to grow at 15-37 °C, pH 5.5-9.0 and at 0-2 % (w/v) NaCl concentration. Flexirubin-type pigments were present. Phylogenetic analysis based on its 16S rRNA gene sequence indicated that strain CA-1 formed a lineage within the family Crocinitomicaceae of the phylum Bacteroidetes that was distinct from Fluviicola hefeinensis MYL-8 (96.8 % sequence similarity) and Fluviicola taffensis DSM 16823 (96.1 %). Strain CA-1 contained menaquinone-6 as a sole respiratory quinone. The major polar lipids were phosphatidylethanolamine, unidentified aminolipids, an unidentified aminophospholipid and an unidentified lipid. The major cellular fatty acids were iso-C15 : 0, iso-C17 : 0 3-OH, C15 : 0 2-OH, summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c) and iso-C15 : 1 G. The DNA G+C content of strain CA-1 was 44.1 mol%. The polyphasic characterization revealed that strain CA-1 represents a novel species in the genus Fluviicola, for which the name Fluviicola kyonggii sp. nov. is proposed. The type strain is CA-1 (=KEMB 9005-526=KACC 19148=NBRC 112684).

摘要

从庆熙大学的森林土壤中分离出一种新型细菌,命名为CA-1菌株。细胞严格需氧,革兰氏染色阴性,过氧化氢酶阳性,氧化酶阴性,无运动性,不形成芽孢,杆状且呈红橙色色素沉着。CA-1菌株可水解酪蛋白和DNA。它能够在15-37°C、pH 5.5-9.0以及0-2%(w/v)的NaCl浓度下生长。存在Flexirubin型色素。基于其16S rRNA基因序列的系统发育分析表明,CA-1菌株在拟杆菌门的Crocinitomicaceae科内形成了一个谱系,该谱系与赫费纳河栖菌MYL-8(序列相似性为96.8%)和塔夫河栖菌DSM 16823(序列相似性为96.1%)不同。CA-1菌株含有甲基萘醌-6作为唯一的呼吸醌。主要极性脂质为磷脂酰乙醇胺、未鉴定的氨基脂质、一种未鉴定的氨基磷脂和一种未鉴定的脂质。主要细胞脂肪酸为异C15:0、异C17:0 3-OH、C15:0 2-OH、总和特征3(C16:1ω7c和/或C16:1ω6c)和异C15:1 G。CA-1菌株的DNA G+C含量为44.1 mol%。多相特征表明,CA-1菌株代表河栖菌属中的一个新物种,为此提出名为庆熙河栖菌(Fluviicola kyonggii sp. nov.)。模式菌株为CA-1(=KEMB 9005-526=KACC 19148=NBRC 112684)。

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