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推导一个多主体功能连接图谱以指导连接组估计。

Deriving a multi-subject functional-connectivity atlas to inform connectome estimation.

作者信息

Phlypo Ronald, Thirion Bertrand, Varoquaux Gaël

出版信息

Med Image Comput Comput Assist Interv. 2014;17(Pt 3):185-92. doi: 10.1007/978-3-319-10443-0_24.

DOI:10.1007/978-3-319-10443-0_24
PMID:25320798
Abstract

The estimation of functional connectivity structure from functional neuroimaging data is an important step toward understanding the mechanisms of various brain diseases and building relevant biomarkers. Yet, such inferences have to deal with the low signal-to-noise ratio and the paucity of the data. With at our disposal a steadily growing olume of publicly available neuroimaging data, it is however possible to improve the estimation procedures involved in connectome mapping. In this work, we propose a novel learning scheme for functional connectivity based on sparse Gaussian graphical models that aims at minimizing the bias induced by the regularization used in the estimation, by carefully separating the estimation of the model support from the coefficients. Moreover, our strategy makes it possible to include new data with a limited computational cost. We illustrate the physiological relevance of he learned prior, that can be identified as a functional connectivity atlas, based on an experiment on 46 subjects of the Human Connectome Dataset.

摘要

从功能神经影像数据估计功能连接结构是理解各种脑部疾病机制和构建相关生物标志物的重要一步。然而,此类推断必须应对低信噪比和数据稀缺的问题。不过,随着我们可获取的公开可用神经影像数据量稳步增长,改进连接组映射中涉及的估计程序成为可能。在这项工作中,我们提出了一种基于稀疏高斯图形模型的功能连接新学习方案,旨在通过仔细分离模型支持的估计和系数,最小化估计中使用正则化所引起的偏差。此外,我们的策略能够以有限的计算成本纳入新数据。基于对人类连接组数据集46名受试者的实验,我们说明了所学习先验的生理相关性,该先验可被识别为功能连接图谱。

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引用本文的文献

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FUNCTIONAL CONNECTIVITY ANALYSIS FOR THALASSEMIA DISEASE BASED ON A GRAPHICAL LASSO MODEL.基于图形拉索模型的地中海贫血病功能连接性分析
Proc IEEE Int Symp Biomed Imaging. 2016 Apr;2016:1295-1298. doi: 10.1109/ISBI.2016.7493504. Epub 2016 Jun 16.
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Graph Lasso-Based Test for Evaluating Functional Brain Connectivity in Sickle Cell Disease.基于图lasso 的方法评估镰状细胞病中的功能脑连接。
Brain Connect. 2017 Sep;7(7):443-453. doi: 10.1089/brain.2016.0474.
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Spin-Echo Resting-State Functional Connectivity in High-Susceptibility Regions: Accuracy, Reliability, and the Impact of Physiological Noise.
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Brain Connect. 2016 May;6(4):283-97. doi: 10.1089/brain.2015.0365. Epub 2016 Mar 23.