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利用CRISPR/Cas9对海鞘胚胎进行组织特异性基因组编辑。

Tissue-specific genome editing in Ciona embryos by CRISPR/Cas9.

作者信息

Stolfi Alberto, Gandhi Shashank, Salek Farhana, Christiaen Lionel

机构信息

Center for Developmental Genetics, Department of Biology, New York University, New York, NY 10003, USA

Center for Developmental Genetics, Department of Biology, New York University, New York, NY 10003, USA.

出版信息

Development. 2014 Nov;141(21):4115-20. doi: 10.1242/dev.114488.

DOI:10.1242/dev.114488
PMID:25336740
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4302896/
Abstract

The CRISPR/Cas9 system has ushered in a new era of targeted genetic manipulations. Here, we report the use of CRISPR/Cas9 to induce double-stranded breaks in the genome of the sea squirt Ciona intestinalis. We use electroporation to deliver CRISPR/Cas9 components for tissue-specific disruption of the Ebf (Collier/Olf/EBF) gene in hundreds of synchronized Ciona embryos. Phenotyping of transfected embryos in the 'F0' generation revealed that endogenous Ebf function is required for specification of Islet-expressing motor ganglion neurons and atrial siphon muscles. We demonstrate that CRISPR/Cas9 is sufficiently effective and specific to generate large numbers of embryos carrying mutations in a targeted gene of interest, which should allow for rapid screening of gene function in Ciona.

摘要

CRISPR/Cas9系统开创了靶向基因操作的新时代。在此,我们报告了使用CRISPR/Cas9在海鞘(Ciona intestinalis)基因组中诱导双链断裂的情况。我们利用电穿孔法将CRISPR/Cas9组件导入数百个同步化的海鞘胚胎中,以实现对Ebf(Collier/Olf/EBF)基因的组织特异性破坏。对“F0”代转染胚胎的表型分析表明,内源性Ebf功能对于表达胰岛的运动神经节神经元和心房虹吸管肌肉的特化是必需的。我们证明,CRISPR/Cas9足够有效且具有特异性,能够产生大量在感兴趣的靶向基因中携带突变的胚胎,这将有助于在海鞘中快速筛选基因功能。

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本文引用的文献

1
CRISPR/Cas9-mediated gene knockout in the ascidian Ciona intestinalis.CRISPR/Cas9介导的海鞘肠道基因敲除
Dev Growth Differ. 2014 Sep;56(7):499-510. doi: 10.1111/dgd.12149. Epub 2014 Sep 12.
2
Divergent mechanisms regulate conserved cardiopharyngeal development and gene expression in distantly related ascidians.不同的机制调控远缘海鞘中保守的心脏咽发育和基因表达。
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Collier/OLF/EBF-dependent transcriptional dynamics control pharyngeal muscle specification from primed cardiopharyngeal progenitors.依赖于 Collier/OLF/EBF 的转录动力学控制从初始心咽祖细胞中特异性分化咽肌。
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Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells.基因组范围内 Cas9 内切酶在哺乳动物细胞中的结合。
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Germ cell mutations of the ascidian Ciona intestinalis with TALE nucleases.利用TALE核酸酶对海鞘文昌鱼的生殖细胞进行突变
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Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system.利用优化的 CRISPR/Cas 系统在活人体细胞内对基因组位点进行动态成像。
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Tissue-specific and ubiquitous gene knockouts by TALEN electroporation provide new approaches to investigating gene function in Ciona.TALEN 电穿孔介导的组织特异性和普遍基因敲除为研究海鞘基因功能提供了新方法。
Development. 2014 Jan;141(2):481-7. doi: 10.1242/dev.099572. Epub 2013 Dec 18.
8
NK4 antagonizes Tbx1/10 to promote cardiac versus pharyngeal muscle fate in the ascidian second heart field.NK4 拮抗 Tbx1/10 以促进文昌鱼第二心脏场中心脏与咽肌命运的决定。
PLoS Biol. 2013 Dec;11(12):e1001725. doi: 10.1371/journal.pbio.1001725. Epub 2013 Dec 3.
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Nat Protoc. 2013 Nov;8(11):2281-2308. doi: 10.1038/nprot.2013.143. Epub 2013 Oct 24.
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Engineering the Caenorhabditis elegans genome using Cas9-triggered homologous recombination.利用 Cas9 触发的同源重组工程化秀丽隐杆线虫基因组。
Nat Methods. 2013 Oct;10(10):1028-34. doi: 10.1038/nmeth.2641. Epub 2013 Sep 1.