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利用景观遗传学在异质环境中模拟浣熊狂犬病变种的两种主要宿主的扩散。

Modelling the dispersal of the two main hosts of the raccoon rabies variant in heterogeneous environments with landscape genetics.

作者信息

Rioux Paquette Sébastien, Talbot Benoit, Garant Dany, Mainguy Julien, Pelletier Fanie

机构信息

Département de biologie, Université de Sherbrooke Sherbrooke, QC, Canada.

Département de biologie, Université de Sherbrooke Sherbrooke, QC, Canada ; Canada Research Chair in Evolutionary Demography and Conservation, Département de biologie, Université de Sherbrooke Sherbrooke, QC, Canada.

出版信息

Evol Appl. 2014 Aug;7(7):734-49. doi: 10.1111/eva.12161. Epub 2014 May 7.

Abstract

Predicting the geographic spread of wildlife epidemics requires knowledge about the movement patterns of disease hosts or vectors. The field of landscape genetics provides valuable approaches to study dispersal indirectly, which in turn may be used to understand patterns of disease spread. Here, we applied landscape genetic analyses and spatially explicit models to identify the potential path of raccoon rabies spread in a mesocarnivore community. We used relatedness estimates derived from microsatellite genotypes of raccoons and striped skunks to investigate their dispersal patterns in a heterogeneous landscape composed predominantly of agricultural, forested and residential areas. Samples were collected in an area covering 22 000 km(2) in southern Québec, where the raccoon rabies variant (RRV) was first detected in 2006. Multiple regressions on distance matrices revealed that genetic distance among male raccoons was strictly a function of geographic distance, while dispersal in female raccoons was significantly reduced by the presence of agricultural fields. In skunks, our results suggested that dispersal is increased in edge habitats between fields and forest fragments in both males and females. Resistance modelling allowed us to identify likely dispersal corridors used by these two rabies hosts, which may prove especially helpful for surveillance and control (e.g. oral vaccination) activities.

摘要

预测野生动物流行病的地理传播需要了解疾病宿主或病媒的移动模式。景观遗传学领域提供了宝贵的方法来间接研究扩散,进而可用于理解疾病传播模式。在此,我们应用景观遗传分析和空间明确模型来确定浣熊狂犬病在一个中型食肉动物群落中传播的潜在路径。我们利用从浣熊和条纹臭鼬的微卫星基因型得出的亲缘关系估计值,来研究它们在一个主要由农业、森林和居民区组成的异质景观中的扩散模式。样本采集于魁北克省南部一个面积达22000平方公里的区域,2006年首次在该区域检测到浣熊狂犬病病毒变种(RRV)。对距离矩阵的多元回归分析表明,雄性浣熊之间的遗传距离严格是地理距离的函数,而雌性浣熊的扩散因农田的存在而显著减少。在臭鼬方面,我们的结果表明,雄性和雌性臭鼬在农田和森林碎片之间的边缘栖息地的扩散都会增加。抗性建模使我们能够确定这两种狂犬病宿主可能使用的扩散走廊,这可能对监测和控制(如口服疫苗接种)活动特别有帮助。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/4227855/2cf7b6c3a583/eva0007-0734-f1.jpg

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