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从分子和形态学数据推断长尾目动物的进化历史:体型简化的案例研究。

Evolutionary history of Chaetognatha inferred from molecular and morphological data: a case study for body plan simplification.

机构信息

Aix-Marseille Université, CNRS, IRD, Avignon Université, IMBE UMR 7263, 13331 Marseille cedex 3, France ; Université de Tunis El Manar, Faculté des Sciences de Tunis, UR11ES12 Biologie de la Reproduction et du Développement animal, 2092 El Manar, Tunis Tunisie.

Aix-Marseille Université, CNRS, IRD, Avignon Université, IMBE UMR 7263, 13331 Marseille cedex 3, France.

出版信息

Front Zool. 2014 Nov 21;11(1):84. doi: 10.1186/s12983-014-0084-7. eCollection 2014.

Abstract

BACKGROUND

Chaetognatha are a phylum of marine carnivorous animals which includes more than 130 extant species. The internal systematics of this group have been intensively debated since it was discovered in the 18(th) century. While they can be traced back to the earlier Cambrian, they are an extraordinarily homogeneous phylum at the morphological level - a fascinating characteristic that puzzled many a scientist who has tried to clarify their taxonomy. Recent studies which have attempted to reconstruct a phylogeny using molecular data have relied on single gene analyses and a somewhat restricted taxon sampling. Here, we present the first large scale phylogenetic study of Chaetognatha based on a combined analysis of nearly the complete ribosomal RNA (rRNA) genes. We use this analysis to infer the evolution of some morphological characters. This work includes 36 extant species, mainly obtained from Tara Oceans Expedition 2009/2012, that represent 16 genera and 6 of the 9 extant families.

RESULTS

Cladistic and phenetic analysis of morphological characters, geometric morphometrics and molecular small subunit (SSU rRNA) and large subunit (LSU rRNA) ribosomal genes phylogenies provided new insights into the relationships and the evolutionary history of Chaetognatha. We propose the following clade structure for the phylum: (((Sagittidae, Krohnittidae), Spadellidae), (Eukrohniidae, Heterokrohniidae)), with the Pterosagittidae included in the Sagittidae. The clade (Sagittidae, Krohnittidae) constitutes the monophyletic order of Aphragmophora. Molecular analyses showed that the Phragmophora are paraphyletic. The Ctenodontina/Flabellodontina and Syngonata/Chorismogonata hypotheses are invalidated on the basis of both morphological and molecular data. This new phylogeny also includes resurrected and modified genera within Sagittidae.

CONCLUSIONS

The distribution of some morphological characters traditionally used in systematics and for species diagnosis suggests that the diversity in Chaetognatha was produced through a process of mosaic evolution. Moreover, chaetognaths have mostly evolved by simplification of their body plan and their history shows numerous convergent events of losses and reversions. The main morphological novelty observed is the acquisition of a second pair of lateral fins in Sagittidae, which represents an adaptation to the holoplanktonic niche.

摘要

背景

箭虫是一类海洋肉食性动物,目前已发现超过 130 种现存物种。自 18 世纪发现以来,该类群的内部系统发育一直受到广泛关注。尽管它们可以追溯到更早的寒武纪,但在形态水平上,它们是一个非常同质的门——这一迷人的特征让许多试图厘清其分类学的科学家感到困惑。最近的研究试图利用分子数据重建系统发育,但这些研究依赖于单基因分析和相对有限的分类群采样。在这里,我们展示了第一个基于近完整核糖体 RNA(rRNA)基因联合分析的箭虫大规模系统发育研究。我们利用这一分析来推断一些形态特征的进化。这项工作包括 36 种现存物种,主要来自 2009/2012 年的 Tara 海洋考察,代表 16 属和 6 个现存科中的 9 个。

结果

形态特征的分支分析和表型分析、几何形态计量学以及小亚基(SSU rRNA)和大亚基(LSU rRNA)核糖体基因的分子系统发育分析为箭虫的关系和进化历史提供了新的见解。我们提出了以下门的分支结构:(((箭虫科,Krohnittidae),箭虫科),(真箭虫科,异箭虫科))),将箭虫科包括在箭虫科中。箭虫科和 Krohnittidae 构成了单系的 Aphragmophora 目。分子分析表明,Phragmophora 是并系的。基于形态和分子数据,Ctenodontina/Flabellodontina 和 Syngonata/Chorismogonata 假说被证明是无效的。这个新的系统发育还包括箭虫科中复活和修改的属。

结论

传统上用于系统发育和物种诊断的一些形态特征的分布表明,箭虫的多样性是通过镶嵌进化过程产生的。此外,箭虫的进化主要是通过简化它们的身体结构来实现的,它们的历史表明了许多丧失和恢复的趋同事件。观察到的主要形态新颖性是在箭虫科中获得第二对侧鳍,这是对全浮游生物生态位的适应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c0c3/4254178/0465cd692d67/12983_2014_84_Fig1_HTML.jpg

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本文引用的文献

4
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.
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8
Assessing the root of bilaterian animals with scalable phylogenomic methods.
Proc Biol Sci. 2009 Dec 22;276(1677):4261-70. doi: 10.1098/rspb.2009.0896. Epub 2009 Sep 16.
9
Mosaic convergence of rodent dentitions.
PLoS One. 2008;3(10):e3607. doi: 10.1371/journal.pone.0003607. Epub 2008 Oct 31.
10
Chaetognath transcriptome reveals ancestral and unique features among bilaterians.
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