Zhang Ningwen, Zhao Jianjun, Lens Frederic, de Visser Joan, Menamo Temesgen, Fang Wen, Xiao Dong, Bucher Johan, Basnet Ram Kumar, Lin Ke, Cheng Feng, Wang Xiaowu, Bonnema Guusje
Wageningen UR Plant Breeding, Wageningen, The Netherlands.
Wageningen UR Plant Breeding, Wageningen, The Netherlands; Horticultural College, Hebei Agricultural University, Baoding, China.
PLoS One. 2014 Dec 4;9(12):e114241. doi: 10.1371/journal.pone.0114241. eCollection 2014.
Brassica rapa displays enormous morphological diversity, with leafy vegetables, turnips and oil crops. Turnips (Brassica rapa subsp. rapa) represent one of the morphotypes, which form tubers and can be used to study the genetics underlying storage organ formation. In the present study we investigated several characteristics of an extensive turnip collection comprising 56 accessions from both Asia (mainly Japanese origin) and Europe. Population structure was calculated using data from 280 evenly distributed SNP markers over 56 turnip accessions. We studied the anatomy of turnip tubers and measured carbohydrate composition of the mature turnip tubers of a subset of the collection. The variation in 16 leaf traits, 12 tuber traits and flowering time was evaluated in five independent experiments for the entire collection. The effect of vernalization on flowering and tuber formation was also investigated. SNP marker profiling basically divided the turnip accessions into two subpopulations, with admixture, generally corresponding with geographical origin (Europe or Asia). The enlarged turnip tuber consists of both hypocotyl and root tissue, but the proportion of the two tissues differs between accessions. The ratio of sucrose to fructose and glucose differed among accessions, while generally starch content was low. The evaluated traits segregated in both subpopulations, with leaf shape, tuber colour and number of shoots per tuber explaining most variation between the two subpopulations. Vernalization resulted in reduced flowering time and smaller tubers for the Asian turnips whereas the European turnips were less affected by vernalization.
芜菁表现出巨大的形态多样性,包括叶菜类、芜菁和油料作物。芜菁(芜菁亚种)是其中一种形态类型,能形成块茎,可用于研究贮藏器官形成的遗传基础。在本研究中,我们调查了一个包含56份来自亚洲(主要源自日本)和欧洲的芜菁种质资源的广泛收集品系的几个特征。利用56份芜菁种质资源中280个均匀分布的单核苷酸多态性(SNP)标记的数据计算群体结构。我们研究了芜菁块茎的解剖结构,并测量了该收集品系一部分成熟芜菁块茎的碳水化合物组成。在五个独立实验中评估了整个收集品系的16个叶片性状、12个块茎性状和开花时间的变异。还研究了春化处理对开花和块茎形成的影响。SNP标记分析基本上将芜菁种质资源分为两个亚群,存在混合情况,总体上与地理来源(欧洲或亚洲)相对应。膨大的芜菁块茎由下胚轴和根组织组成,但不同种质资源中这两种组织的比例不同。不同种质资源中蔗糖与果糖和葡萄糖的比例不同,而淀粉含量总体较低。所评估的性状在两个亚群中均有分离,叶形、块茎颜色和每个块茎的枝条数解释了两个亚群之间的大部分变异。春化处理导致亚洲芜菁的开花时间缩短,块茎变小,而欧洲芜菁受春化处理的影响较小。