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与胚胎发育潜能相关的人卵丘细胞中长链非编码RNA的差异表达:一项微阵列分析

Differential Expression of Long Noncoding RNAs in Human Cumulus Cells Related to Embryo Developmental Potential: A Microarray Analysis.

作者信息

Xu Xiao-Feng, Li Juan, Cao Yun-Xia, Chen Da-Wei, Zhang Zhi-Guo, He Xiao-Jin, Ji Dong-Mei, Chen Bei-Li

机构信息

Reproductive Medicine Center, The First Affiliated Hospital, Anhui Medical University, Hefei, China Institute of Reproductive Genetics, The First Affiliated Hospital, Anhui Medical University, Hefei, China.

Reproductive Medicine Center, The First Affiliated Hospital, Anhui Medical University, Hefei, China Institute of Reproductive Genetics, The First Affiliated Hospital, Anhui Medical University, Hefei, China

出版信息

Reprod Sci. 2015 Jun;22(6):672-8. doi: 10.1177/1933719114561562. Epub 2014 Dec 18.

Abstract

Long noncoding RNAs (lncRNAs), which are prevalently transcribed in the genome, are involved in a variety of biological functions, yet little is known about their abundance in human cumulus cells (CCs) during oocyte development. Here, we describe the expression profile of lncRNAs in 3 pairs of cumulus cells from mature oocytes that result in high-quality embryo (H-CCs) and from oocytes that result in poor-quality embryo (P-CCs) using microarray analysis. In this study, a total of 20 563 lncRNAs were expressed in human CCs. One hundred and twenty four lncRNAs were consistently upregulated, and 509 lncRNAs were consistently downregulated in all samples analyzed (fold change ≥ 2.0, P < .05). Quantitative real-time polymerase chain reaction (qRT-PCR) was used to validate 5 upregulated and 7 downregulated lncRNAs. The qRT-PCR results in the study were confirmed to be consistent with the microarray results. Network analysis was used for further research. The results displayed the differentially expressed lncRNAs in P-CCs between H-CCs, which suggested that lncRNAs may contribute to the processes of oocyte and early embryo development.

摘要

长链非编码RNA(lncRNAs)在基因组中广泛转录,参与多种生物学功能,但关于其在卵母细胞发育过程中在人卵丘细胞(CCs)中的丰度却知之甚少。在此,我们使用微阵列分析描述了来自产生高质量胚胎的成熟卵母细胞的3对卵丘细胞(H-CCs)和来自产生低质量胚胎的卵母细胞的3对卵丘细胞(P-CCs)中lncRNAs的表达谱。在本研究中,共有20563种lncRNAs在人卵丘细胞中表达。在所有分析样本中,124种lncRNAs持续上调,509种lncRNAs持续下调(倍数变化≥2.0,P <.05)。使用定量实时聚合酶链反应(qRT-PCR)验证了5种上调和7种下调的lncRNAs。本研究中的qRT-PCR结果被证实与微阵列结果一致。使用网络分析进行进一步研究。结果显示了H-CCs与P-CCs之间差异表达的lncRNAs,这表明lncRNAs可能有助于卵母细胞和早期胚胎发育过程。

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