海洋放线菌Sciscionella菌株SE31的基因组序列草图
Draft genome sequence of a marine actinobacteria Sciscionella strain SE31.
作者信息
Teo Wee Fei Aaron, Wee Wei Yee, Choo Siew Woh, Tan Geok Yuan Annie
机构信息
Microbial Resources Laboratory, Institute of Biological Sciences, University of Malaya, 50603 Kuala Lumpur, Malaysia.
Department of Oral Biology and Biomedical Sciences, Faculty of Dentistry, University of Malaya, 50603 Kuala Lumpur, Malaysia.
出版信息
Mar Genomics. 2015 Apr;20:11-2. doi: 10.1016/j.margen.2014.12.006. Epub 2014 Dec 29.
The bacterium strain SE31, a member of the genus Sciscionella, was isolated from intertidal sediments collected from Cape Rachado, Malaysia. The high quality draft genome sequence of Sciscionella strain SE31 with a genome size of approximately 7.4 Mbp is reported. Preliminary analysis revealed 46 putative gene clusters involved in the biosynthesis of secondary metabolites and 113 putative genes that are associated with bacterial virulence, disease and defense. Availability of the genome sequence of Sciscionella SE31 will contribute to a better understanding of the genus Sciscionella.
细菌菌株SE31是Sciscionella属的成员，从马来西亚拉查多角采集的潮间带沉积物中分离得到。本文报道了Sciscionella菌株SE31的高质量草图基因组序列，其基因组大小约为7.4 Mbp。初步分析显示，有46个参与次生代谢物生物合成的假定基因簇，以及113个与细菌毒力、疾病和防御相关的假定基因。Sciscionella SE31基因组序列的可得性将有助于更好地了解Sciscionella属。
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