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非洲甘薯象甲(Cylas puncticollis,鞘翅目,锥象科)的转录组分析及系统性RNA干扰反应

Transcriptome analysis and systemic RNAi response in the African sweetpotato weevil (Cylas puncticollis, Coleoptera, Brentidae).

作者信息

Prentice Katterinne, Pertry Ine, Christiaens Olivier, Bauters Lander, Bailey Ana, Niblett Chuck, Ghislain Marc, Gheysen Godelieve, Smagghe Guy

机构信息

Department of Crop Protection, Faculty of Bioscience Engineering, Ghent University, B-9000 Ghent, Belgium; Department of Molecular Biotechnology, Faculty of Bioscience Engineering, Ghent University, B-9000 Ghent, Belgium; International Potato Center (CIP), Genomics and Biotechnology Program, Nairobi 00603, Kenya.

VIB, Institute of Plant Biotechnology Outreach, Technologiepark 3, B-9052 Ghent, Belgium; Ghent University, Department Molecular Biotechnology, Institute of Plant Biotechnology Outreach, Technologiepark 3, B-9052 Ghent, Belgium.

出版信息

PLoS One. 2015 Jan 15;10(1):e0115336. doi: 10.1371/journal.pone.0115336. eCollection 2015.

Abstract

The African sweetpotato weevil (SPW) Cylas puncticollis Boheman is one of the most important constraints of sweetpotato production in Sub-Saharan Africa and yet is largely an uncharacterized insect pest. Here, we report on the transcriptome analysis of SPW generated using an Illumina platform. More than 213 million sequencing reads were obtained and assembled into 89,599 contigs. This assembly was followed by a gene ontology annotation. Subsequently, a transcriptome search showed that the necessary RNAi components relevant to the three major RNAi pathways, were found to be expressed in SPW. To address the functionality of the RNAi mechanism in this species, dsRNA was injected into second instar larvae targeting laccase2, a gene which encodes an enzyme involved in the sclerotization of insect exoskeleton. The body of treated insects showed inhibition of sclerotization, leading eventually to death. Quantitative Real Time PCR (qPCR) confirmed this phenotype to be the result of gene silencing. Together, our results provide valuable sequence data on this important insect pest and demonstrate that a functional RNAi pathway with a strong and systemic effect is present in SPW and can further be explored as a new strategy for controlling this important pest.

摘要

非洲甘薯象甲(SPW)Cylas puncticollis Boheman是撒哈拉以南非洲甘薯生产的最重要限制因素之一,但在很大程度上仍是一种未被充分了解的害虫。在此,我们报告了使用Illumina平台对SPW进行的转录组分析。获得了超过2.13亿条测序读数,并组装成89,599个重叠群。此组装之后进行了基因本体注释。随后,转录组搜索显示,与三种主要RNAi途径相关的必要RNAi成分在SPW中表达。为了研究该物种中RNAi机制的功能,将dsRNA注射到二龄幼虫体内,靶向漆酶2,该基因编码一种参与昆虫外骨骼硬化的酶。处理过的昆虫身体显示出硬化受到抑制,最终导致死亡。实时定量PCR(qPCR)证实这种表型是基因沉默的结果。总之,我们的结果提供了关于这种重要害虫的有价值的序列数据,并证明SPW中存在具有强大且系统性效应的功能性RNAi途径,并且可以进一步探索将其作为控制这种重要害虫的新策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5477/4295849/83c99fa4c734/pone.0115336.g001.jpg

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