Department of Crop Protection, Molecular Entomology, Federal University of Pelotas, Pelotas, Brazil.
Department of Plants and Crops, Ghent University, Ghent, Belgium.
Sci Rep. 2020 Mar 17;10(1):4856. doi: 10.1038/s41598-020-60078-3.
Over the past few years, the use of RNA interference (RNAi) for insect pest management has attracted considerable interest in academia and industry as a pest-specific and environment-friendly strategy for pest control. For the success of this technique, the presence of core RNAi genes and a functional silencing machinery is essential. Therefore, the aim of this study was to test whether the Neotropical brown stinkbug Euschistus heros has the main RNAi core genes and whether the supply of dsRNA could generate an efficient gene silencing response. To do this, total mRNA of all developmental stages was sequenced on an Illumina platform, followed by a de novo assembly, gene annotation and RNAi-related gene identification. Once RNAi-related genes were identified, nuclease activities in hemolymph were investigated through an ex vivo assay. To test the functionality of the siRNA machinery, E. heros adults were microinjected with ~28 ng per mg of insect of a dsRNA targeting the V-ATPase-A gene. Mortality, relative transcript levels of V-ATPase-A, and the expression of the genes involved in the siRNA machinery, Dicer-2 (DCR-2) and Argonaute 2 (AGO-2), were analyzed. Transcriptome sequencing generated more than 126 million sequenced reads, and these were annotated in approximately 80,000 contigs. The search of RNAi-related genes resulted in 47 genes involved in the three major RNAi pathways, with the absence of sid-like homologous. Although ex vivo incubation of dsRNA in E. heros hemolymph showed rapid degradation, there was 35% mortality at 4 days after treatment and a significant reduction in V-ATPase-A gene expression. These results indicated that although sid-like genes are lacking, the dsRNA uptake mechanism was very efficient. Also, 2-fold and 4-fold overexpression of DCR-2 and AGO-2, respectively, after dsRNA supply indicated the activation of the siRNA machinery. Consequently, E. heros has proven to be sensitive to RNAi upon injection of dsRNA into its hemocoel. We believe that this finding together with a publically available transcriptome and the validation of a responsive RNAi machinery provide a starting point for future field applications against one of the most important soybean pests in South America.
在过去的几年中,RNA 干扰(RNAi)在昆虫害虫管理中的应用引起了学术界和工业界的极大兴趣,它是一种针对害虫且对环境友好的害虫防治策略。为了成功应用这项技术,核心 RNAi 基因的存在和功能沉默机制是必不可少的。因此,本研究旨在测试 Neotropical 棕色臭虫 Euschistus heros 是否具有主要的 RNAi 核心基因,以及 dsRNA 的供应是否可以产生有效的基因沉默反应。为此,我们在 Illumina 平台上对所有发育阶段的总 mRNA 进行了测序,随后进行从头组装、基因注释和 RNAi 相关基因鉴定。一旦鉴定出 RNAi 相关基因,我们就通过体外测定法研究了血淋巴中的核酸酶活性。为了测试 siRNA 机制的功能,我们将针对 V-ATPase-A 基因的约 28ng/mg 昆虫的 dsRNA 微注射到 E. heros 成虫体内。分析了死亡率、V-ATPase-A 的相对转录水平以及 siRNA 机制的基因(Dicer-2 (DCR-2) 和 Argonaute 2 (AGO-2))的表达情况。转录组测序生成了超过 1.26 亿个测序reads,这些 reads 在大约 80,000 个连续基因中得到了注释。对 RNAi 相关基因的搜索结果产生了 47 个参与三个主要 RNAi 途径的基因,其中缺乏类似 sid 的基因。尽管 dsRNA 在 E. heros 血淋巴中的体外孵育显示出快速降解,但在处理后 4 天仍有 35%的死亡率,并且 V-ATPase-A 基因的表达显著降低。这些结果表明,尽管缺乏类似 sid 的基因,但 dsRNA 的摄取机制非常有效。此外,dsRNA 供应后 DCR-2 和 AGO-2 的表达分别增加了 2 倍和 4 倍,表明 siRNA 机制被激活。因此,E. heros 对注射到其血腔中的 dsRNA 表现出敏感性。我们相信,这一发现以及公开可用的转录组和响应性 RNAi 机制的验证,为未来在南美的一种重要大豆害虫防治方面的田间应用提供了起点。