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黑腹果蝇体细胞组织及发育过程中类copia转座元件的基因组分布

Genomic distribution of copia-like transposable elements in somatic tissues and during development of Drosophila melanogaster.

作者信息

Di Franco C, Pisano C, Dimitri P, Gigliotti S, Junakovic N

机构信息

Centro per lo Studio degli Acidi Nucleici C.N.R., Università La Sapienza, Roma, Italy.

出版信息

Chromosoma. 1989 Dec;98(6):402-10. doi: 10.1007/BF00292785.

DOI:10.1007/BF00292785
PMID:2560696
Abstract

The genomic distribution of elements of the copia, 412, B 104, mdg 1, mdg 4 and 1731 transposon families was compared by the Southern technique in DNA preparations extracted from brains, salivary glands and adult flies of two related Drosophila lines. The copia, 412 and mdg 1 sequences were also probed in DNA from sperm, embryos, and 1st and 2nd instar larvae. The homogeneity of the patterns observed shows that somatic transposition is unlikely to occur frequently. A correlation between mobility and the euchromatic or heterochromatic location of transposable elements is discussed. In addition, an explanation of the variable band intensities of transposable elements in Southern autoradiographs is proposed.

摘要

运用Southern技术，对从两个相关果蝇品系的大脑、唾液腺及成年果蝇中提取的DNA样本进行分析，比较了copia、412、B 104、mdg 1、mdg 4和1731转座子家族元件的基因组分布情况。同时，也用copia、412和mdg 1序列对精子、胚胎以及一龄和二龄幼虫的DNA进行了探测。观察到的图谱均一性表明，体细胞转座不太可能频繁发生。文中讨论了转座元件的移动性与其在常染色质或异染色质位置之间的相关性。此外，还对Southern放射自显影片中转座元件可变带强度给出了解释。

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1
Genomic distribution of copia-like transposable elements in somatic tissues and during development of Drosophila melanogaster.黑腹果蝇体细胞组织及发育过程中类copia转座元件的基因组分布
Chromosoma. 1989 Dec;98(6):402-10. doi: 10.1007/BF00292785.
2
Environmental stresses and mobilization of transposable elements in inbred lines of Drosophila melanogaster.黑腹果蝇近交系中的环境压力与转座元件的激活
Mutat Res. 1991 May;248(1):51-60. doi: 10.1016/0027-5107(91)90087-5.
3
Interactions between transposable elements for insertion in the Drosophila melanogaster genome.黑腹果蝇基因组中可转座元件之间的插入相互作用。
Heredity (Edinb). 1989 Aug;63 ( Pt 1):125-33. doi: 10.1038/hdy.1989.83.
4
[Comparative analysis of the localization and mobility of retrotransposons in sibling species Drosophila simulans and Drosophila melanogaster].[黑腹果蝇和拟暗果蝇姊妹种中反转录转座子的定位与移动性比较分析]
Genetika. 1992 Apr;28(4):85-97.
5
Intragenomic distribution and stability of transposable elements in euchromatin and heterochromatin of Drosophila melanogaster: elements with inverted repeats Bari 1, hobo, and pogo.黑腹果蝇常染色质和异染色质中转座元件的基因组内分布及稳定性：具有反向重复序列的元件Bari 1、hobo和pogo
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6
Genomic distribution of transposable elements among individuals of an inbred Drosophila line.近交系果蝇个体中转座元件的基因组分布。
Genetica. 1992;86(1-3):1-11. doi: 10.1007/BF00133706.
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Rates of movement of transposable elements in Drosophila melanogaster.黑腹果蝇中转座元件的移动速率。
Mol Gen Genet. 1996 May 23;251(2):130-8. doi: 10.1007/BF02172910.
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[Transpositions of mobile elements mdg4 (gypsy) and hobo in somatic and germ cells of a genetically unstable mutator strain of Drosophila melanogaster].[黑腹果蝇遗传不稳定突变株的体细胞和生殖细胞中移动元件mdg4（吉普赛）和流浪汉的转座]
Genetika. 1991 Sep;27(9):1519-30.
9
Identification of an unusual structure in the Drosophila melanogaster transposable element copia: evidence for copia transposition through an RNA intermediate.黑腹果蝇转座因子copia中一种异常结构的鉴定：copia通过RNA中间体进行转座的证据。
Gene. 1991 Jul 22;103(2):179-84. doi: 10.1016/0378-1119(91)90271-c.
10
Changes in the chromosomal insertion pattern of the copia element during the process of making chromosomes homozygous in Drosophila melanogaster.在黑腹果蝇染色体纯合化过程中，copia元件染色体插入模式的变化。
Mol Gen Genet. 1995 Jan 20;246(2):206-11. doi: 10.1007/BF00294683.

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J Mol Evol. 2007 Apr;64(4):438-47. doi: 10.1007/s00239-006-0108-9. Epub 2007 Mar 27.
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Morphological and molecular characterization of new Drosophila cell lines established from a strain permissive for gypsy transposition.从允许gypsy转座的品系建立的新型果蝇细胞系的形态学和分子特征
In Vitro Cell Dev Biol Anim. 1998 Nov-Dec;34(10):799-804. doi: 10.1007/s11626-998-0034-9.
3
Potentially active copies of the gypsy retroelement are confined to the Y chromosome of some strains of Drosophila melanogaster possibly as the result of the female-specific effect of the flamenco gene.

本文引用的文献

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Drosophila genome organization: conserved and dynamic aspects.果蝇基因组组织：保守与动态方面。
Annu Rev Genet. 1981;15:219-64. doi: 10.1146/annurev.ge.15.120181.001251.
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The polytene chromosomes in the fat body nuclei of Drosophila melanogaster.黑腹果蝇脂肪体细胞核中的多线染色体。
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Amplification of genes for chorion proteins during oogenesis in Drosophila melanogaster.黑腹果蝇卵子发生过程中绒毛膜蛋白基因的扩增
吉普赛逆转录元件的潜在活性拷贝仅限于某些黑腹果蝇品系的Y染色体，这可能是由于弗拉门戈基因的雌性特异性效应所致。
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Intragenomic distribution and stability of transposable elements in euchromatin and heterochromatin of Drosophila melanogaster: non-LTR retrotransposon.黑腹果蝇常染色质和异染色质中转座元件的基因组内分布及稳定性：非长末端重复逆转座子
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Rates of movement of transposable elements in Drosophila melanogaster.黑腹果蝇中转座元件的移动速率。
Mol Gen Genet. 1996 May 23;251(2):130-8. doi: 10.1007/BF02172910.
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DNA representation of variegating heterochromatic P-element inserts in diploid and polytene tissues of Drosophila melanogaster.果蝇二倍体和多线组织中斑驳异染色质P因子插入的DNA表现
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Estimation of transposable element copy numbers in Drosophila melanogaster.黑腹果蝇中转座元件拷贝数的估计
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LINE-related elements in Drosophila melanogaster.黑腹果蝇中与LINE相关的元件。
Genetica. 1994;94(2-3):173-80. doi: 10.1007/BF01443431.
9
High transposition rates of Osvaldo, a new Drosophila buzzatii retrotransposon.一种新的果蝇布扎蒂逆转座子奥斯瓦尔多的高转座率。
Mol Gen Genet. 1994 Dec 15;245(6):661-74. doi: 10.1007/BF00297273.
10
Preferential Y chromosomal location of TRIM, a novel transposable element of Drosophila miranda, obscura group.TRIM（一种新的可转座元件，位于果蝇拟暗果蝇 obscura 组）在 Y 染色体上的优先定位。
Chromosoma. 1991 Dec;101(3):169-79. doi: 10.1007/BF00355366.
Proc Natl Acad Sci U S A. 1980 Feb;77(2):1096-100. doi: 10.1073/pnas.77.2.1096.
4
Structural organization of transposable element mdg4 from Drosophila melanogaster and a nucleotide sequence of its long terminal repeats.黑腹果蝇转座元件mdg4的结构组织及其长末端重复序列的核苷酸序列。
Nucleic Acids Res. 1984 Apr 25;12(8):3707-23. doi: 10.1093/nar/12.8.3707.
5
High-frequency excision of transposable element Tc 1 in the nematode Caenorhabditis elegans is limited to somatic cells.线虫秀丽隐杆线虫中转座元件Tc 1的高频切除仅限于体细胞。
Cell. 1984 Mar;36(3):599-605. doi: 10.1016/0092-8674(84)90339-8.
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Interdigitated arrangement of two oligo(A)-terminated DNA sequences in Drosophila.果蝇中两个寡聚（A）末端DNA序列的交错排列。
Nucleic Acids Res. 1983 Aug 25;11(16):5475-82. doi: 10.1093/nar/11.16.5475.
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Actin gene expression is modulated by ecdysterone in a Drosophila cell line.在果蝇细胞系中，肌动蛋白基因的表达受蜕皮激素调节。
J Mol Biol. 1983 Mar 5;164(3):419-30. doi: 10.1016/0022-2836(83)90059-1.
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Analysis of a dispersed repetitive DNA sequence in isogenic lines of Drosophila.果蝇同基因系中分散重复DNA序列的分析。
Chromosoma. 1981;82(4):471-92. doi: 10.1007/BF00295007.
9
General properties of mobile dispersed genetic elements in Drosophila melanogaster.黑腹果蝇中可移动分散遗传元件的一般特性。
Cold Spring Harb Symp Quant Biol. 1981;45 Pt 2:655-65. doi: 10.1101/sqb.1981.045.01.083.
10
Constancy of somatic DNA organization in developmentally regulated regions of the Drosophila genome.果蝇基因组发育调控区域中体细胞DNA组织的稳定性。
Proc Natl Acad Sci U S A. 1981 Apr;78(4):2417-21. doi: 10.1073/pnas.78.4.2417.