共生和非共生微小根霉菌株CBS 344.29和ATCC 62417的基因组序列草图
Draft Genome Sequences of Symbiotic and Nonsymbiotic Rhizopus microsporus Strains CBS 344.29 and ATCC 62417.
作者信息
Horn Fabian, Üzüm Zerrin, Möbius Nadine, Guthke Reinhard, Linde Jörg, Hertweck Christian
机构信息
Systems Biology/Bioinformatics, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute, Jena, Germany.
Biomolecular Chemistry, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute, Jena, Germany.
出版信息
Genome Announc. 2015 Jan 22;3(1):e01370-14. doi: 10.1128/genomeA.01370-14.
Abstract
Specific Rhizopus microsporus pathovars harbor bacterial endosymbionts (Burkholderia rhizoxinica) for the production of a phytotoxin. Here, we present the draft genome sequences of two R. microsporus strains, one symbiotic (ATCC 62417), and one endosymbiont-free (CBS 344.29). The gene predictions were supported by RNA sequencing (RNA-seq) data. The functional annotation sets the basis for comparative analyses.
摘要
特定的微小根霉致病型携带细菌内共生体（根霉素伯克霍尔德菌）以产生一种植物毒素。在此，我们展示了两株微小根霉的基因组草图序列，一株是共生型（ATCC 62417），另一株是无内共生体型（CBS 344.29）。基因预测得到了RNA测序（RNA-seq）数据的支持。功能注释为比较分析奠定了基础。
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