• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种快速、一步法对黄绿木霉和里氏木霉进行分子鉴定的方法。

A rapid, one step molecular identification of Trichoderma citrinoviride and Trichoderma reesei.

作者信息

Saroj Dina B, Dengeti Shrinivas N, Aher Supriya, Gupta Anil K

机构信息

Advanced Enzyme Technologies Ltd., 5th Floor, A WING, Sun Magnetica, LIC Service Road, Louiswadi, Thane (W), 400 604, Maharashtra, India,

出版信息

World J Microbiol Biotechnol. 2015 Jun;31(6):995-9. doi: 10.1007/s11274-015-1839-9. Epub 2015 Mar 10.

DOI:10.1007/s11274-015-1839-9
PMID:25752236
Abstract

Trichoderma species are widely used as production hosts for industrial enzymes. Identification of Trichoderma species requires a complex molecular biology based identification involving amplification and sequencing of multiple genes. Industrial laboratories are required to run identification tests repeatedly in cell banking procedures and also to prove absence of production host in the product. Such demands can be fulfilled by a brief method which enables confirmation of strain identity. This communication describes one step identification method for two common Trichoderma species; T. citrinoviride and T. reesei, based on identification of polymorphic region in the nucleotide sequence of translation elongation factor 1 alpha. A unique forward primer and common reverse primer resulted in 153 and 139 bp amplicon for T. citrinoviride and T. reesei, respectively. Simplification was further introduced by using mycelium as template for PCR amplification. Method described in this communication allows rapid, one step identification of two Trichoderma species.

摘要

木霉属物种被广泛用作工业酶的生产宿主。木霉属物种的鉴定需要基于复杂分子生物学的鉴定,包括多个基因的扩增和测序。工业实验室需要在细胞库程序中反复进行鉴定测试,并证明产品中不存在生产宿主。这样的需求可以通过一种能够确认菌株身份的简便方法来满足。本通讯描述了一种针对两种常见木霉属物种(黄绿木霉和里氏木霉)的一步鉴定方法,该方法基于对翻译延伸因子1α核苷酸序列中多态性区域的鉴定。一个独特的正向引物和一个通用的反向引物分别产生了153 bp和139 bp的黄绿木霉和里氏木霉扩增子。通过使用菌丝体作为PCR扩增模板进一步简化了方法。本通讯中描述的方法允许对两种木霉属物种进行快速的一步鉴定。

相似文献

1
A rapid, one step molecular identification of Trichoderma citrinoviride and Trichoderma reesei.一种快速、一步法对黄绿木霉和里氏木霉进行分子鉴定的方法。
World J Microbiol Biotechnol. 2015 Jun;31(6):995-9. doi: 10.1007/s11274-015-1839-9. Epub 2015 Mar 10.
2
Molecular reidentification of human pathogenic Trichoderma isolates as Trichoderma longibrachiatum and Trichoderma citrinoviride.将人类致病木霉菌株重新鉴定为长枝木霉和黄绿木霉。
Med Mycol. 1999 Feb;37(1):25-33.
3
Three New Soil-inhabiting Species of Trichoderma in the Stromaticum Clade with Test of Their Antagonism to Pathogens.层生木霉分支中三种新的土壤栖息木霉属物种及其对病原菌的拮抗作用测试
Curr Microbiol. 2017 Sep;74(9):1049-1060. doi: 10.1007/s00284-017-1282-2. Epub 2017 Jun 19.
4
Trichoderma biodiversity in China: evidence for a North to South distribution of species in East Asia.中国木霉的生物多样性:东亚地区木霉物种从北到南分布的证据。
FEMS Microbiol Lett. 2005 Oct 15;251(2):251-7. doi: 10.1016/j.femsle.2005.08.034.
5
Genetic analysis reveals diversity and genetic relationship among Trichoderma isolates from potting media, cultivated soil and uncultivated soil.遗传分析揭示了来自盆栽介质、耕地土壤和未开垦土壤的木霉菌株之间的多样性和遗传关系。
BMC Microbiol. 2015 Jul 28;15:147. doi: 10.1186/s12866-015-0483-8.
6
Precise detection and tracing of Trichoderma hamatum 382 in compost-amended potting mixes by using molecular markers.利用分子标记对添加堆肥的盆栽基质中哈茨木霉382进行精确检测与追踪。
Appl Environ Microbiol. 1999 Dec;65(12):5421-6. doi: 10.1128/AEM.65.12.5421-5426.1999.
7
Genetic diversity of Trichoderma atroviride strains collected in Poland and identification of loci useful in detection of within-species diversity.在波兰收集的深绿木霉菌株的遗传多样性以及用于检测种内多样性的基因座鉴定。
Folia Microbiol (Praha). 2015 Jul;60(4):297-307. doi: 10.1007/s12223-015-0385-z. Epub 2015 Mar 20.
8
Trichoderma songyi sp. nov., a new species associated with the pine mushroom (Tricholoma matsutake).松口蘑木霉新种,一种与松口蘑(Tricholoma matsutake)相关的新物种。
Antonie Van Leeuwenhoek. 2014 Oct;106(4):593-603. doi: 10.1007/s10482-014-0230-4. Epub 2014 Jul 23.
9
Discovery from a large-scaled survey of Trichoderma in soil of China.从中国土壤中大量采集木霉属的研究发现。
Sci Rep. 2017 Aug 22;7(1):9090. doi: 10.1038/s41598-017-07807-3.
10
Identification of Trichoderma strains from building materials by ITS1 ribotyping, UP-PCR fingerprinting and UP-PCR cross hybridization.通过ITS1核糖体分型、UP-PCR指纹图谱和UP-PCR交叉杂交鉴定建筑材料中的木霉菌株。
FEMS Microbiol Lett. 2000 Apr 15;185(2):129-34. doi: 10.1111/j.1574-6968.2000.tb09050.x.

引用本文的文献

1
Identification patterns of Trichoderma strains using morphological characteristics, phylogenetic analyses and lignocellulolytic activities.利用形态特征、系统发育分析和木质纤维素降解活性鉴定木霉菌株。
Mol Biol Rep. 2021 Apr;48(4):3285-3301. doi: 10.1007/s11033-021-06321-0. Epub 2021 Apr 20.
2
Endophytic isolated from mountain-cultivated ginseng () has great potential as a biocontrol agent against ginseng pathogens.从山地栽培人参中分离出的内生菌作为人参病原菌的生物防治剂具有巨大潜力。
J Ginseng Res. 2019 Jul;43(3):408-420. doi: 10.1016/j.jgr.2018.03.002. Epub 2018 Apr 4.

本文引用的文献

1
β -Glucosidases from the fungus trichoderma: an efficient cellulase machinery in biotechnological applications.真菌木霉中的β-葡萄糖苷酶:生物技术应用中的高效纤维素酶机制。
Biomed Res Int. 2013;2013:203735. doi: 10.1155/2013/203735. Epub 2013 Aug 1.
2
DNA barcoding survey of Trichoderma diversity in soil and litter of the Colombian lowland Amazonian rainforest reveals Trichoderma strigosellum sp. nov. and other species.在哥伦比亚低地亚马逊雨林的土壤和凋落物中进行的 Trichoderma 多样性 DNA 条形码调查揭示了 Trichoderma strigosellum sp. nov. 和其他物种。
Antonie Van Leeuwenhoek. 2013 Nov;104(5):657-74. doi: 10.1007/s10482-013-9975-4. Epub 2013 Jul 25.
3
Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction.
Primer-BLAST:一种用于设计聚合酶链反应(PCR)目标特异性引物的工具。
BMC Bioinformatics. 2012 Jun 18;13:134. doi: 10.1186/1471-2105-13-134.
4
Molecular phylogeny and species delimitation in the section Longibrachiatum of Trichoderma.长头管囊霉属 Longibrachiatum 节的分子系统发育和种的划分。
Fungal Genet Biol. 2012 May;49(5):358-68. doi: 10.1016/j.fgb.2012.02.004. Epub 2012 Mar 1.
5
Enzyme production by filamentous fungi: analysis of the secretome of Trichoderma reesei grown on unconventional carbon source.丝状真菌的酶生产:分析里氏木霉在非常规碳源上生长的分泌组。
Microb Cell Fact. 2011 Aug 23;10:68. doi: 10.1186/1475-2859-10-68.
6
Species delimitation in fungal endophyte diversity studies and its implications in ecological and biogeographic inferences.真菌内生菌多样性研究中的物种划分及其对生态和生物地理推断的影响。
Mol Ecol. 2011 Jul;20(14):3001-13. doi: 10.1111/j.1365-294X.2011.05110.x. Epub 2011 May 9.
7
Rapid identification of Aspergillus fumigatus within the section Fumigati.快速鉴定烟曲霉属中的烟曲霉种。
BMC Microbiol. 2011 Apr 21;11:82. doi: 10.1186/1471-2180-11-82.
8
ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases.ITS 作为真菌的环境 DNA 条形码:计算机模拟方法揭示了潜在的 PCR 偏倚。
BMC Microbiol. 2010 Jul 9;10:189. doi: 10.1186/1471-2180-10-189.
9
Molecular identification of Trichoderma species associated with Pleurotus ostreatus and natural substrates of the oyster mushroom.与糙皮侧耳及牡蛎菇天然基质相关的木霉种类的分子鉴定。
FEMS Microbiol Lett. 2009 Nov;300(1):58-67. doi: 10.1111/j.1574-6968.2009.01765.x. Epub 2009 Aug 21.
10
Phylogenetic species recognition and species concepts in fungi.真菌中的系统发育物种识别与物种概念
Fungal Genet Biol. 2000 Oct;31(1):21-32. doi: 10.1006/fgbi.2000.1228.