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促进生物学建模的基于社区的信息标准的协调发展:COMBINE 计划。

Promoting Coordinated Development of Community-Based Information Standards for Modeling in Biology: The COMBINE Initiative.

机构信息

Computing and Mathematical Sciences, California Institute of Technology , Pasadena, CA , USA.

Auckland Bioengineering Institute, University of Auckland , Auckland , New Zealand.

出版信息

Front Bioeng Biotechnol. 2015 Feb 24;3:19. doi: 10.3389/fbioe.2015.00019. eCollection 2015.

Abstract

The Computational Modeling in Biology Network (COMBINE) is a consortium of groups involved in the development of open community standards and formats used in computational modeling in biology. COMBINE's aim is to act as a coordinator, facilitator, and resource for different standardization efforts whose domains of use cover related areas of the computational biology space. In this perspective article, we summarize COMBINE, its general organization, and the community standards and other efforts involved in it. Our goals are to help guide readers toward standards that may be suitable for their research activities, as well as to direct interested readers to relevant communities where they can best expect to receive assistance in how to develop interoperable computational models.

摘要

计算生物学建模网络(COMBINE)是一个由参与开发生物学计算建模中使用的开放社区标准和格式的小组组成的联盟。COMBINE 的目标是充当协调者、促进者和资源,为不同的标准化工作提供支持,这些标准化工作的使用领域涵盖计算生物学领域的相关领域。在这篇观点文章中,我们总结了 COMBINE、其总体组织以及涉及的社区标准和其他工作。我们的目标是帮助指导读者选择可能适合他们研究活动的标准,并引导有兴趣的读者到相关社区,在那里他们可以最好地期望获得有关如何开发可互操作计算模型的帮助。

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