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具有快速倒易空间静电学的3D RISM理论。

3D RISM theory with fast reciprocal-space electrostatics.

作者信息

Heil Jochen, Kast Stefan M

机构信息

Physikalische Chemie III, Technische Universität Dortmund, Otto-Hahn-Str. 6, 44227 Dortmund, Germany.

出版信息

J Chem Phys. 2015 Mar 21;142(11):114107. doi: 10.1063/1.4914321.

Abstract

The calculation of electrostatic solute-solvent interactions in 3D RISM ("three-dimensional reference interaction site model") integral equation theory is recast in a form that allows for a computational treatment analogous to the "particle-mesh Ewald" formalism as used for molecular simulations. In addition, relations that connect 3D RISM correlation functions and interaction potentials with thermodynamic quantities such as the chemical potential and average solute-solvent interaction energy are reformulated in a way that calculations of expensive real-space electrostatic terms on the 3D grid are completely avoided. These methodical enhancements allow for both, a significant speedup particularly for large solute systems and a smoother convergence of predicted thermodynamic quantities with respect to box size, as illustrated for several benchmark systems.

摘要

三维RISM(“三维参考相互作用位点模型”)积分方程理论中静电溶质 - 溶剂相互作用的计算被重新表述为一种形式,该形式允许进行类似于分子模拟中使用的“粒子网格埃瓦尔德”形式的计算处理。此外,将三维RISM相关函数和相互作用势与诸如化学势和平均溶质 - 溶剂相互作用能等热力学量联系起来的关系式也被重新表述,从而完全避免了在三维网格上进行昂贵的实空间静电项计算。这些方法上的改进使得对于大型溶质系统而言,计算速度显著加快,并且预测的热力学量相对于盒子大小的收敛更加平滑,这在几个基准系统中得到了说明。

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