Xue Xianli, Wang Rong, Tu Tao, Shi Pengjun, Ma Rui, Luo Huiying, Yao Bin, Su Xiaoyun
Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing, People's Republic of China.
Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing, People's Republic of China College of Life Sciences, Shanxi University, Taiyuan, People's Republic of China.
Appl Environ Microbiol. 2015 Jun;81(11):3823-33. doi: 10.1128/AEM.00432-15. Epub 2015 Mar 27.
The genome of the thermophilic bacterium Caldicellulosiruptor bescii encodes three multimodular enzymes with identical C-terminal domain organizations containing two consecutive CBM3b modules and one glycoside hydrolase (GH) family 48 (GH48) catalytic module. However, the three proteins differ much in their N termini. Among these proteins, CelA (or C. bescii Cel9A [CbCel9A]/Cel48A) with a GH9/CBM3c binary partner in the N terminus has been shown to use a novel strategy to degrade crystalline cellulose, which leads to its outstanding cellulose-cleaving activity. Here we show that C. bescii Xyn10C (CbXyn10C), the N-terminal GH10 domain from CbXyn10C/Cel48B, can also degrade crystalline cellulose, in addition to heterogeneous xylans and barley β-glucan. The data from substrate competition assays, mutational studies, molecular modeling, and docking point analyses point to the existence of only one catalytic center in the bifunctional xylanase/β-glucanase. The specific activities of the recombinant CbXyn10C on Avicel and filter paper were comparable to those of GH9/CBM3c of the robust CelA expressed in Escherichia coli. Appending one or two cellulose-binding CBM3bs enhanced the activities of CbXyn10C in degrading crystalline celluloses, which were again comparable to those of the GH9/CBM3c-CBM3b-CBM3b truncation mutant of CelA. Since CbXyn10C/Cel48B and CelA have similar domain organizations and high sequence homology, the endocellulase activity observed in CbXyn10C leads us to speculate that CbXyn10C/Cel48B may use the same strategy that CelA uses to hydrolyze crystalline cellulose, thus helping the excellent crystalline cellulose degrader C. bescii acquire energy from the environment. In addition, we also demonstrate that CbXyn10C may be an interesting candidate enzyme for biotechnology due to its versatility in hydrolyzing multiple substrates with different glycosidic linkages.
嗜热细菌嗜热栖热放线菌(Caldicellulosiruptor bescii)的基因组编码三种多模块酶,它们具有相同的C端结构域组织,包含两个连续的CBM3b模块和一个糖苷水解酶(GH)家族48(GH48)催化模块。然而,这三种蛋白质的N端差异很大。在这些蛋白质中,N端带有GH9/CBM3c二元伴侣的CelA(或嗜热栖热放线菌Cel9A [CbCel9A]/Cel48A)已被证明采用一种新策略来降解结晶纤维素,这导致其具有出色的纤维素切割活性。在这里,我们表明嗜热栖热放线菌Xyn10C(CbXyn10C),即CbXyn10C/Cel48B的N端GH10结构域,除了能降解异源木聚糖和大麦β-葡聚糖外,还能降解结晶纤维素。底物竞争试验、突变研究、分子建模和对接点分析的数据表明,双功能木聚糖酶/β-葡聚糖酶中仅存在一个催化中心。重组CbXyn10C对微晶纤维素和滤纸的比活性与在大肠杆菌中表达的强大的CelA的GH9/CBM3c相当。附加一个或两个纤维素结合CBM3b可增强CbXyn10C降解结晶纤维素的活性,这再次与CelA的GH9/CBM3c-CBM3b-CBM3b截短突变体相当。由于CbXyn10C/Cel48B和CelA具有相似的结构域组织和高度的序列同源性,在CbXyn10C中观察到的内切纤维素酶活性使我们推测CbXyn10C/Cel48B可能采用与CelA相同的策略来水解结晶纤维素,从而帮助出色的结晶纤维素降解菌嗜热栖热放线菌从环境中获取能量。此外,我们还证明,由于CbXyn10C在水解具有不同糖苷键的多种底物方面具有多功能性,它可能是生物技术中一种有趣的候选酶。