Guan Xiaojing, Silva Pradeepa, Gyenai Kwaku, Xu Jun, Geng Tuoyu, Smith Edward
Department of Animal and Poultry Sciences, Virginia Tech, Blacksburg, VA, 24061, USA,
Biochem Genet. 2015 Apr;53(1-3):29-41. doi: 10.1007/s10528-015-9668-y. Epub 2015 Mar 28.
The domesticated turkey, Meleagris gallopavo, is believed to be a single breed with several varieties whose relatedness and origins remain poorly understood. Using the mitochondrial genome sequence (GenBank accession no. EF153719) that our group first reported, we investigated the relationships among 15 of the most widely occurring turkey varieties using D-loop and 16S RNA sequences. We included, as a non-traditional outgroup, mtDNA sequence information from wild turkey varieties. A total of 24 SNPs, including 18 in the D-loop and 6 in the 16S rRNA, was identified, validated and used. Of the 15 haplotypes detected based on these SNPs, 7 were unique to wild turkeys. Nucleotide diversity estimates were relatively low when compared to those reported for chickens and other livestock. Network and phylogenetic analyses showed a closer relationship among heritage varieties than between heritage and wild turkeys. The mtDNA data provide additional evidence that suggest a recent divergence of turkey varieties.
家火鸡(学名:Meleagris gallopavo)被认为是一个单一品种,有几个变种,但其亲缘关系和起源仍知之甚少。我们利用本研究小组首次报道的线粒体基因组序列(GenBank登录号:EF153719),通过D环和16S rRNA序列研究了15个最常见的火鸡变种之间的关系。作为非传统外类群,我们纳入了野生火鸡变种的线粒体DNA序列信息。共鉴定、验证并使用了24个单核苷酸多态性(SNP),其中18个在D环,6个在16S rRNA。基于这些SNP检测到的15个单倍型中,7个是野生火鸡特有的。与鸡和其他家畜的报道相比,核苷酸多样性估计值相对较低。网络分析和系统发育分析表明,传统变种之间的关系比传统变种与野生火鸡之间的关系更密切。线粒体DNA数据提供了更多证据,表明火鸡变种是最近才分化的。