Desai Shuchi H, Rabinovitch-Deere Christine A, Fan Zhiliang, Atsumi Shota
Department of Chemistry, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA.
Microbiology Graduate Group, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA.
Microb Cell Fact. 2015 Apr 15;14:52. doi: 10.1186/s12934-015-0232-6.
Liquid fuels needed for the global transportation industry can be produced from sugars derived from plant-based lignocellulosics. Lignocellulosics contain a range of sugars, only some of which (such as cellulose) have been shown to be utilizable by microorganisms capable of producing biofuels. Cellobionic acid makes up a small but significant portion of lignocellulosic degradation products, and had not previously been investigated as an utilizable substrate. However, aldonic acids such as cellobionic acid are the primary products of a promising new group of lignocellulosic-degrading enzymes, which makes this compound group worthy of study. Cellobionic acid doesn't inhibit cellulose degradation enzymes and so its inclusion would increase lignocellulosic degradation efficiency. Also, its use would increase overall product yield from lignocellulose substrate. For these reasons, cellobionic acid has gained increased attention for cellulosic biofuel production.
This study describes the discovery that Escherichia coli are naturally able to utilize cellobionic acid as a sole carbon source with efficiency comparable to that of glucose and the construction of an E. coli strain able to produce the drop-in biofuel candidate isobutanol from cellobionic acid. The gene primarily responsible for growth of E. coli on cellobionic acid is ascB, a gene previously thought to be cryptic (expressed only after incurring specific mutations in nearby regulatory genes). In addition to AscB, the ascB knockout strain can be complemented by the cellobionic acid phosphorylase from the fungus Neurospora crassa. An E. coli strain engineered to express the isobutanol production pathway was successfully able to convert cellobionic acid into isobutanol. Furthermore, to demonstrate potential application of this strain in a sequential two-step bioprocessing system, E. coli was grown on hydrolysate (that was degraded by a fungus) and was successfully able to produce isobutanol.
These results demonstrate that cellobionic acid is a viable carbon source for biofuel production. This work suggests that with further optimization, a bacteria-fungus co-culture could be used in decreased-cost biomass-based biofuel production systems.
全球交通运输业所需的液体燃料可由植物基木质纤维素衍生的糖类生产。木质纤维素含有多种糖类,其中只有一部分(如纤维素)已被证明可被能够生产生物燃料的微生物利用。纤维二糖酸在木质纤维素降解产物中占比虽小但很重要,此前尚未作为可利用底物进行研究。然而,像纤维二糖酸这样的糖醛酸是一组有前景的新型木质纤维素降解酶的主要产物,这使得这类化合物值得研究。纤维二糖酸不会抑制纤维素降解酶,因此将其纳入会提高木质纤维素的降解效率。此外,使用它会提高木质纤维素底物的总体产物产量。基于这些原因,纤维二糖酸在纤维素生物燃料生产中受到了越来越多的关注。
本研究描述了一项发现,即大肠杆菌天然能够将纤维二糖酸作为唯一碳源利用,效率与葡萄糖相当,还构建了一种能够从纤维二糖酸生产直接替代生物燃料候选物异丁醇的大肠杆菌菌株。主要负责大肠杆菌在纤维二糖酸上生长的基因是ascB,该基因此前被认为是隐性的(只有在附近调控基因发生特定突变后才会表达)。除了AscB之外,ascB基因敲除菌株可以被来自真菌粗糙脉孢菌的纤维二糖酸磷酸化酶互补。经过基因工程改造以表达异丁醇生产途径的大肠杆菌菌株成功地将纤维二糖酸转化为异丁醇。此外,为了证明该菌株在连续两步生物处理系统中的潜在应用,大肠杆菌在水解产物(由一种真菌降解)上生长,并成功地生产出了异丁醇。
这些结果表明纤维二糖酸是生物燃料生产的一种可行碳源。这项工作表明,通过进一步优化,细菌 - 真菌共培养可用于成本降低的基于生物质的生物燃料生产系统。