Singhal Neelja, Srivastava Abhishikha, Kumar Manish, Virdi Jugsharan Singh
Department of Microbiology, University of Delhi South Campus, Benito Juarez Road, New Delhi, India.
Department of Biophysics, University of Delhi South Campus, Benito Juarez Road, New Delhi, India.
PLoS One. 2015 Apr 28;10(4):e0123564. doi: 10.1371/journal.pone.0123564. eCollection 2014.
Yersiniosis caused by Yersinia enterocolitica has been reported from all continents. The bacterial species is divided into more than fifty serovars and six biovars viz. 1A, 1B, 2, 3, 4 and 5 which differ in geographical distribution, ecological niches and pathogenicity. Most Y.enterocolitica strains harbor chromosomal genes for two β-lactamases, blaA an Ambler class A penicillinase and blaB an Ambler class C inducible cephalosporinase. In the present study, susceptibility to b-lactam antibiotics and β-lactamase inhibitor was studied for Y. enterocolitica strains of biovars 1A, 1B, 2 and 4. We observed that β-lactamases were expressed differentially among strains of different biovars. To understand the molecular mechanisms underlying such differential expression, the sequences of genes and promoters of blaA were compared. Also, the variants of blaA present in different biovars were modeled and docked with amoxicillin and clavulanic acid. The mRNA secondary structures of blaA variants were also predicted in-silico. Our findings indicated that neither variations in the promoter regions, nor the secondary structures of mRNA contributed to higher/lower expression of blaA in different biovars. Analysis of H-bonding residues of blaA variants with amoxicillin and clavulanic acid revealed that if amino acid residues of a β-lactamase interacting with amoxicillin and the clavulanic acid were similar, clavulanic acid was effective in engaging the enzyme, accounting for a significant reduction in MIC of amoxicillin-clavulanate. This finding might aid in designing better β-lactamase inhibitors with improved efficiencies in future.
由小肠结肠炎耶尔森菌引起的耶尔森菌病在各大洲均有报道。该细菌物种分为五十多个血清型和六个生物变种,即1A、1B、2、3、4和5,它们在地理分布、生态位和致病性方面存在差异。大多数小肠结肠炎耶尔森菌菌株携带两种β-内酰胺酶的染色体基因,blaA是一种安布勒A类青霉素酶,blaB是一种安布勒C类诱导型头孢菌素酶。在本研究中,对生物变种1A、1B、2和4的小肠结肠炎耶尔森菌菌株进行了β-内酰胺抗生素和β-内酰胺酶抑制剂敏感性研究。我们观察到β-内酰胺酶在不同生物变种的菌株中表达存在差异。为了解这种差异表达背后的分子机制,比较了blaA基因和启动子的序列。此外,对不同生物变种中存在的blaA变体进行了建模,并与阿莫西林和克拉维酸进行对接。还通过计算机模拟预测了blaA变体的mRNA二级结构。我们的研究结果表明,启动子区域的变异和mRNA的二级结构均未导致blaA在不同生物变种中表达升高/降低。对blaA变体与阿莫西林和克拉维酸的氢键残基分析表明,如果β-内酰胺酶与阿莫西林和克拉维酸相互作用的氨基酸残基相似,克拉维酸就能有效地结合该酶,使阿莫西林-克拉维酸的最低抑菌浓度显著降低。这一发现可能有助于未来设计出效率更高的β-内酰胺酶抑制剂。