Suppr超能文献

使用蚀斑试验和单叠氮碘化丙啶联合实时逆转录聚合酶链反应检测活的小鼠诺如病毒

Detection of viable murine norovirus using the plaque assay and propidium-monoazide-combined real-time reverse transcription-polymerase chain reaction.

作者信息

Lee Minhwa, Seo Dong Joo, Seo Jina, Oh Hyejin, Jeon Su Been, Ha Sang-Do, Myoung Jinjong, Choi In-Soo, Choi Changsun

机构信息

Department of Food and Nutrition, Chung-Ang University, Anseong, Gyeonggi 456-756, South Korea.

School of Food Science and Technology, Chung-Ang University, Anseong, Gyeonggi 456-756, South Korea.

出版信息

J Virol Methods. 2015 Sep 1;221:57-61. doi: 10.1016/j.jviromet.2015.04.018. Epub 2015 Apr 25.

Abstract

Human norovirus (HuNoV) is the most common cause of gastroenteritis worldwide. The lack of a virus culture system makes it difficult to determine the viability of norovirus by only reverse transcription-polymerase chain reaction (RT-PCR) or real-time quantitative RT-PCR (qRT-PCR). The aim of this study was to investigate the detection of viable murine norovirus (MNV) by combining propidium monoazide (PMA) or ethidium monoazide (EMA) with qRT-PCR. MNV (5.21log10PFU/mL) was subjected to heat treatment at room temperature, 65, 70, 75, 80, 85, or 90°C in a water bath for 1min. The plaque assay, qRT-PCR, PMA-combined qRT-PCR, and EMA-combined qRT-PCR were then performed with heat exposed MNV samples. The MNV titer was reduced by 0.38, 1.34, and 3.71log10PFU/mL at temperatures of 65, 70, and 75°C, respectively. MNV was reduced >4.21log10PFU/mL at 80, 85, and 90°C heat inactivation. PMA (EMA) value equation for the interpretation of the viability of MNV was derived as follows: PMA (EMA) value=-logRN-logRP (RN: the relative quantity value of the not-treated sample, and RP: the relative quantity value of the PMA- or EMA-treated sample as determined by qRT-PCR). By PMA-combined qRT-PCR, the viable PMA value was 0.32, 0.83, and 2.62 for the 65, 70, and 75°C preheated MNVs, respectively. The viable PMA values for the viruses heated at 80, 85, and 90°C were all greater than 3.0, which was the cutoff value for discriminating between live and dead MNVs. The results of EMA-combined qRT-PCR were similar to those of qRT-PCR. Thus, PMA-combined qRT-PCR correlated well with the plaque assay in detecting viable MNVs.

摘要

人诺如病毒(HuNoV)是全球范围内肠胃炎最常见的病因。由于缺乏病毒培养系统,仅通过逆转录聚合酶链反应(RT-PCR)或实时定量RT-PCR(qRT-PCR)难以确定诺如病毒的生存能力。本研究的目的是通过将单叠氮化丙锭(PMA)或单叠氮化乙锭(EMA)与qRT-PCR相结合来研究活鼠诺如病毒(MNV)的检测。将MNV(5.21log10PFU/mL)在室温、65、70、75、80、85或90°C的水浴中热处理1分钟。然后对热暴露的MNV样本进行噬斑测定、qRT-PCR、PMA联合qRT-PCR和EMA联合qRT-PCR。在65、70和75°C时,MNV滴度分别降低了0.38、1.34和3.71log10PFU/mL。在80、85和90°C热灭活时,MNV降低>4.21log10PFU/mL。用于解释MNV生存能力的PMA(EMA)值方程推导如下:PMA(EMA)值=-logRN-logRP(RN:未处理样本的相对数量值,RP:通过qRT-PCR测定的PMA或EMA处理样本的相对数量值)。通过PMA联合qRT-PCR,65、70和75°C预热的MNV的活PMA值分别为0.32、0.83和2.62。在80、85和90°C加热的病毒的活PMA值均大于3.0,这是区分活MNV和死MNV的临界值。EMA联合qRT-PCR的结果与qRT-PCR的结果相似。因此,PMA联合qRT-PCR在检测活MNV方面与噬斑测定相关性良好。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验