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尿酸氧化酶:一级结构及其进化意义

Urate oxidase: primary structure and evolutionary implications.

作者信息

Wu X W, Lee C C, Muzny D M, Caskey C T

机构信息

Verna and Marrs McLean Department of Biochemistry, Baylor College of Medicine, Houston, TX 77030.

出版信息

Proc Natl Acad Sci U S A. 1989 Dec;86(23):9412-6. doi: 10.1073/pnas.86.23.9412.

DOI:10.1073/pnas.86.23.9412
PMID:2594778
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC298506/
Abstract

Urate oxidase, or uricase (EC 1.7.3.3), is a peroxisomal enzyme that catalyzes the oxidation of uric acid to allantoin in most mammals. In humans and certain other primates, however, the enzyme has been lost by some unknown mechanism. To identify the molecular basis for this loss, urate oxidase cDNA clones were isolated from pig, mouse, and baboon, and their DNA sequences were determined. The mouse urate oxidase open reading frame encodes a 303-amino acid polypeptide, while the pig and baboon urate oxidase cDNAs encode a 304-amino acid polypeptide due to a single codon deletion/insertion event. The authenticity of this single additional codon was confirmed by sequencing the mouse and pig genomic copies of the gene. The urate oxidase sequence contains a domain similar to the type 2 copper binding motif found in other copper binding proteins, suggesting that the copper ion in urate oxidase is coordinated as a type 2 structure. Based upon a comparison of the NH2-terminal peptide and deduced sequences, we propose that the maturation of pig urate oxidase involves the posttranslational cleavage of a six-amino acid peptide. Two nonsense mutations were found in the human urate oxidase gene, which confirms, at the molecular level, that the urate oxidase gene in humans is nonfunctional. The sequence comparisons favor the hypothesis that the loss of urate oxidase in humans is due to a sudden mutational event rather than a progressive mutational process.

摘要

尿酸氧化酶,即尿酸酶(EC 1.7.3.3),是一种过氧化物酶体酶,在大多数哺乳动物中催化尿酸氧化为尿囊素。然而,在人类和某些其他灵长类动物中,该酶通过某种未知机制已经丢失。为了确定这种丢失的分子基础,从猪、小鼠和狒狒中分离出尿酸氧化酶cDNA克隆,并测定了它们的DNA序列。小鼠尿酸氧化酶开放阅读框编码一个303个氨基酸的多肽,而猪和狒狒的尿酸氧化酶cDNA由于单个密码子的缺失/插入事件编码一个304个氨基酸的多肽。通过对该基因的小鼠和猪基因组拷贝进行测序,证实了这个额外密码子的真实性。尿酸氧化酶序列包含一个与其他铜结合蛋白中发现的2型铜结合基序相似的结构域,表明尿酸氧化酶中的铜离子以2型结构配位。基于对氨基末端肽和推导序列的比较,我们提出猪尿酸氧化酶的成熟涉及一个六氨基酸肽的翻译后切割。在人类尿酸氧化酶基因中发现了两个无义突变,这在分子水平上证实了人类尿酸氧化酶基因是无功能的。序列比较支持这样一种假说,即人类尿酸氧化酶的丢失是由于突然的突变事件而非渐进的突变过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c2a1/298506/dfd581fef3cd/pnas00290-0372-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c2a1/298506/dfd581fef3cd/pnas00290-0372-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c2a1/298506/dfd581fef3cd/pnas00290-0372-a.jpg

相似文献

1
Urate oxidase: primary structure and evolutionary implications.尿酸氧化酶:一级结构及其进化意义
Proc Natl Acad Sci U S A. 1989 Dec;86(23):9412-6. doi: 10.1073/pnas.86.23.9412.
2
Generation of cDNA probes directed by amino acid sequence: cloning of urate oxidase.由氨基酸序列指导生成cDNA探针:尿酸氧化酶的克隆
Science. 1988 Mar 11;239(4845):1288-91. doi: 10.1126/science.3344434.
3
Isolation and sequence determination of a cDNA clone for rat peroxisomal urate oxidase: liver-specific expression in the rat.大鼠过氧化物酶体尿酸氧化酶cDNA克隆的分离与序列测定:大鼠肝脏特异性表达
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4
Two independent mutational events in the loss of urate oxidase during hominoid evolution.在类人猿进化过程中尿酸氧化酶缺失的两个独立突变事件。
J Mol Evol. 1992 Jan;34(1):78-84. doi: 10.1007/BF00163854.
5
Cloning of rabbit uricase cDNA reveals a conserved carboxy-terminal tripeptide in three species.兔尿酸酶cDNA的克隆揭示了三个物种中保守的羧基末端三肽。
Biochim Biophys Acta. 1989 Jun 1;1008(1):116-8. doi: 10.1016/0167-4781(89)90178-4.
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Human urate oxidase gene: cloning and partial sequence analysis reveal a stop codon within the fifth exon.人类尿酸氧化酶基因:克隆及部分序列分析显示第五外显子内存在一个终止密码子。
Biochem Biophys Res Commun. 1990 Sep 14;171(2):641-6. doi: 10.1016/0006-291x(90)91194-w.
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Exclusion of urate oxidase as a candidate gene for hyperuricosuria in the Dalmatian dog using an interbreed backcross.利用品种间回交法排除尿酸氧化酶作为大麦町犬高尿酸尿症候选基因的可能性。
J Hered. 2005;96(7):750-4. doi: 10.1093/jhered/esi078. Epub 2005 Jun 15.
8
Hyperuricemia and urate nephropathy in urate oxidase-deficient mice.尿酸氧化酶缺陷小鼠的高尿酸血症和尿酸盐肾病
Proc Natl Acad Sci U S A. 1994 Jan 18;91(2):742-6. doi: 10.1073/pnas.91.2.742.
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Cloning and sequence analysis of cDNA for rat liver uricase.大鼠肝脏尿酸酶cDNA的克隆与序列分析
J Biol Chem. 1988 Nov 15;263(32):16677-81.
10
Molecular evolution of the urate oxidase-encoding gene in hominoid primates: nonsense mutations.类人猿灵长类动物中尿酸氧化酶编码基因的分子进化:无义突变。
Gene. 1991 Dec 30;109(2):281-4. doi: 10.1016/0378-1119(91)90622-i.

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Isolation and Characterization of Highly Active Uricase from spp. Strain UR1.来自某菌株UR1的高活性尿酸酶的分离与鉴定
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Association Between TyG-BMI Index and Hyperuricemia in Adult Women.

本文引用的文献

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Studies on uricase. I. Preparation, purification, and properties of a cuproprotein.尿酸酶研究。I. 一种铜蛋白的制备、纯化及性质
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Uric acid provides an antioxidant defense in humans against oxidant- and radical-caused aging and cancer: a hypothesis.尿酸为人类提供抗氧化防御,抵御由氧化剂和自由基引起的衰老和癌症:一种假说。
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Internal duplication and evolution of human ceruloplasmin.人铜蓝蛋白的内部重复与进化
成年女性TyG-BMI指数与高尿酸血症的关联
Endocrinol Diabetes Metab. 2025 Mar;8(2):e70028. doi: 10.1002/edm2.70028.
4
Uric Acid: A Biomarker and Pathogenic Factor of Affective Disorders and Neurodegenerative Diseases.尿酸:情感障碍和神经退行性疾病的生物标志物及致病因素
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Genetic control over biogenic crystal morphogenesis in zebrafish.斑马鱼中生物源晶体形态发生的遗传控制
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Approach of a small protein to the biomimetic bis-(μ-oxo) dicopper active-site installed in MOF-808 pores with restricted access perturbs substrate selectivity of oxidase nanozyme.一种小蛋白质接近安装在具有受限通道的MOF-808孔中的仿生双(μ-氧代)二铜活性位点,会扰乱氧化酶纳米酶的底物选择性。
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7
Recombinant Expression and Functional Assessment of Uricase from a Pertinent Origin of the Enzyme, sp. Strain 17-1.来自相关酶源菌株17-1的尿酸酶的重组表达及功能评估
Iran J Biotechnol. 2024 Jan 1;22(1):e3602. doi: 10.30498/ijb.2024.379614.3602. eCollection 2024 Jan.
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Drug screening in human physiologic medium identifies uric acid as an inhibitor of rigosertib efficacy.在人体生理介质中进行药物筛选,鉴定出尿酸是 rigosertib 疗效的抑制剂。
JCI Insight. 2024 May 30;9(13):e174329. doi: 10.1172/jci.insight.174329.
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Dysuricemia.排尿障碍血症
Biomedicines. 2023 Nov 28;11(12):3169. doi: 10.3390/biomedicines11123169.
10
Cysteine Enrichment Mediates Co-Option of Uricase in Reptilian Skin and Transition to Uricotelism.半胱氨酸富集介导尿酸酶在爬行动物皮肤中的共选择和尿酸排泄的转变。
Mol Biol Evol. 2023 Sep 1;40(9). doi: 10.1093/molbev/msad200.
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Isolation of microgram quantities of proteins from polyacrylamide gels for amino acid sequence analysis.从聚丙烯酰胺凝胶中分离微克量蛋白质用于氨基酸序列分析。
Methods Enzymol. 1983;91:227-36. doi: 10.1016/s0076-6879(83)91019-4.
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"Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate--polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A.“蛋白质免疫印迹法”:蛋白质从十二烷基硫酸钠 - 聚丙烯酰胺凝胶电泳转移至未修饰的硝酸纤维素膜上,并用抗体和放射性碘化蛋白A进行放射自显影检测。
Anal Biochem. 1981 Apr;112(2):195-203. doi: 10.1016/0003-2697(81)90281-5.
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A simple and very efficient method for generating cDNA libraries.一种简单且非常有效的生成cDNA文库的方法。
Gene. 1983 Nov;25(2-3):263-9. doi: 10.1016/0378-1119(83)90230-5.
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Cleavage of structural proteins during the assembly of the head of bacteriophage T4.在噬菌体T4头部组装过程中结构蛋白的切割
Nature. 1970 Aug 15;227(5259):680-5. doi: 10.1038/227680a0.
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Urate oxidase in primate phylogenesis.
Eur J Biochem. 1970 Jan;12(1):3-5. doi: 10.1111/j.1432-1033.1970.tb00813.x.
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Uricase. Subunit composition and resistance to denaturants.
Biochemistry. 1974 Feb 26;13(5):888-92. doi: 10.1021/bi00702a009.
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Molecular evolution of myoglobin and the fossil record: a phylogenetic synthesis.肌红蛋白的分子进化与化石记录:系统发育综合研究
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