• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

拟南芥BAG5-钙调蛋白复合物的晶体学分析。

Crystallographic analysis of the Arabidopsis thaliana BAG5-calmodulin protein complex.

作者信息

Cui Boyang, Fang Shasha, Xing Yangfei, Shen Yuequan, Yang Xue

机构信息

State Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300071, People's Republic of China.

出版信息

Acta Crystallogr F Struct Biol Commun. 2015 Jul;71(Pt 7):870-5. doi: 10.1107/S2053230X15005956. Epub 2015 Jun 27.

DOI:10.1107/S2053230X15005956
PMID:26144232
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4498708/
Abstract

Arabidopsis thaliana BAG5 (AtBAG5) belongs to the plant BAG (Bcl-2-associated athanogene) family that performs diverse functions ranging from growth and development to abiotic stress and senescence. BAG family members can act as nucleotide-exchange factors for heat-shock protein 70 (Hsp70) through binding of their evolutionarily conserved BAG domains to the Hsp70 ATPase domain, and thus may be involved in the regulation of chaperone-mediated protein folding in plants. AtBAG5 is distinguished from other family members by the presence of a unique IQ motif adjacent to the BAG domain; this motif is specific for calmodulin (CaM) binding, indicating a potential role in the plant calcium signalling pathway. To provide a better understanding of the IQ motif-mediated interaction between AtBAG5 and CaM, the two proteins were expressed and purified separately and then co-crystallized together. Diffraction-quality crystals of the complex were grown using the sitting-drop vapour-diffusion technique from a condition consisting of 0.1 M Tris-HCl pH 8.5, 2.5 M ammonium sulfate. The crystals belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 64.56, b = 74.89, c = 117.09 Å. X-ray diffraction data were recorded to a resolution of 2.5 Å from a single crystal using synchrotron radiation. Assuming the presence of two molecules in the asymmetric unit, a Matthews coefficient of 2.44 Å(3) Da(-1) was calculated, corresponding to a solvent content of approximately 50%.

摘要

拟南芥BAG5(AtBAG5)属于植物BAG(Bcl-2相关抗凋亡基因)家族,该家族具有从生长发育到非生物胁迫和衰老等多种功能。BAG家族成员可通过其进化保守的BAG结构域与热休克蛋白70(Hsp70)的ATP酶结构域结合,充当Hsp70的核苷酸交换因子,因此可能参与植物中伴侣蛋白介导的蛋白质折叠调控。AtBAG5与其他家族成员的区别在于,其BAG结构域附近存在一个独特的IQ基序;该基序对钙调蛋白(CaM)结合具有特异性,表明其在植物钙信号通路中可能发挥作用。为了更好地理解IQ基序介导的AtBAG5与CaM之间的相互作用,分别表达并纯化了这两种蛋白质,然后将它们一起进行共结晶。使用坐滴气相扩散技术,从由0.1 M Tris-HCl pH 8.5、2.5 M硫酸铵组成的条件中生长出复合物的衍射质量晶体。这些晶体属于空间群P2(1)2(1)2(1),晶胞参数a = 64.56、b = 74.89、c = 117.09 Å。使用同步辐射从单个晶体记录了分辨率为2.5 Å的X射线衍射数据。假设不对称单位中存在两个分子,计算出的马修斯系数为2.44 Å(3) Da(-1),对应于约50%的溶剂含量。

相似文献

1
Crystallographic analysis of the Arabidopsis thaliana BAG5-calmodulin protein complex.拟南芥BAG5-钙调蛋白复合物的晶体学分析。
Acta Crystallogr F Struct Biol Commun. 2015 Jul;71(Pt 7):870-5. doi: 10.1107/S2053230X15005956. Epub 2015 Jun 27.
2
CaM/BAG5/Hsc70 signaling complex dynamically regulates leaf senescence.钙调素/BAG5/Hsc70 信号复合物动态调节叶片衰老。
Sci Rep. 2016 Aug 19;6:31889. doi: 10.1038/srep31889.
3
Expression, purification, crystallization and preliminary X-ray analysis of calmodulin in complex with the regulatory domain of the plasma-membrane Ca2+-ATPase ACA8.钙调蛋白与质膜Ca2+-ATP酶ACA8调节结构域复合物的表达、纯化、结晶及初步X射线分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Mar 1;66(Pt 3):361-3. doi: 10.1107/S1744309110003805. Epub 2010 Feb 27.
4
Cloning, purification, crystallization and preliminary X-ray analysis of the receiver domain of the histidine kinase CKI1 from Arabidopsis thaliana.拟南芥组氨酸激酶CKI1受体结构域的克隆、纯化、结晶及初步X射线分析。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 May 1;65(Pt 5):478-81. doi: 10.1107/S1744309109012032. Epub 2009 Apr 24.
5
Crystallization and preliminary X-ray diffraction analyses of the TIR domains of three TIR-NB-LRR proteins that are involved in disease resistance in Arabidopsis thaliana.参与拟南芥抗病性的三种TIR-NB-LRR蛋白的TIR结构域的结晶及初步X射线衍射分析。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Nov;69(Pt 11):1275-80. doi: 10.1107/S1744309113026614. Epub 2013 Oct 30.
6
Crystallization and preliminary X-ray data analysis of a DJ-1 homologue from Arabidopsis thaliana (AtDJ-1D).来自拟南芥的DJ-1同源物(AtDJ-1D)的结晶及初步X射线数据分析。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Jan 1;68(Pt 1):101-4. doi: 10.1107/S1744309111050597. Epub 2011 Dec 24.
7
Purification, crystallization and preliminary crystallographic analysis of deoxyuridine triphosphate nucleotidohydrolase from Arabidopsis thaliana.拟南芥脱氧尿苷三磷酸核苷酸水解酶的纯化、结晶及初步晶体学分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 May 1;63(Pt 5):409-11. doi: 10.1107/S1744309107016004. Epub 2007 Apr 14.
8
Structural insight into plant programmed cell death mediated by BAG proteins in Arabidopsis thaliana.拟南芥中BAG蛋白介导的植物程序性细胞死亡的结构解析
Acta Crystallogr D Biol Crystallogr. 2013 Jun;69(Pt 6):934-45. doi: 10.1107/S0907444913003624. Epub 2013 May 2.
9
Ectodomain of plasmodesmata-localized protein 5 in Arabidopsis: expression, purification, crystallization and crystallographic analysis.拟南芥中胞间连丝定位蛋白5的胞外结构域:表达、纯化、结晶及晶体学分析
Acta Crystallogr F Struct Biol Commun. 2017 Sep 1;73(Pt 9):532-535. doi: 10.1107/S2053230X1701250X. Epub 2017 Aug 31.
10
Purification, crystallization and preliminary X-ray crystallographic analysis of Arabidopsis thaliana dynamin-related protein 1A GTPase-GED fusion protein.拟南芥动力蛋白相关蛋白1A GTP酶-鸟苷酸结合结构域融合蛋白的纯化、结晶及初步X射线晶体学分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Jan 1;68(Pt 1):69-72. doi: 10.1107/S1744309111047634. Epub 2011 Dec 24.

引用本文的文献

1
Functional insights of plant bcl-2-associated ahanogene (BAG) proteins: Multi-taskers in diverse cellular signal transduction pathways.植物bcl-2相关同源基因(BAG)蛋白的功能见解:多种细胞信号转导途径中的多面手
Front Plant Sci. 2023 Mar 28;14:1136873. doi: 10.3389/fpls.2023.1136873. eCollection 2023.
2
The Bcl-2-associated athanogene gene family in tobacco () and the function of in leaf senescence.烟草中的Bcl-2相关永生基因家族及其在叶片衰老中的功能。
Front Plant Sci. 2023 Feb 9;14:1108588. doi: 10.3389/fpls.2023.1108588. eCollection 2023.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Structural insight into plant programmed cell death mediated by BAG proteins in Arabidopsis thaliana.拟南芥中BAG蛋白介导的植物程序性细胞死亡的结构解析
Acta Crystallogr D Biol Crystallogr. 2013 Jun;69(Pt 6):934-45. doi: 10.1107/S0907444913003624. Epub 2013 May 2.
3
Crystal structure of the ternary complex of a NaV C-terminal domain, a fibroblast growth factor homologous factor, and calmodulin.钠离子通道 C 端结构域、成纤维细胞生长因子同源因子与钙调蛋白三元复合物的晶体结构
Structure. 2012 Jul 3;20(7):1167-76. doi: 10.1016/j.str.2012.05.001. Epub 2012 Jun 14.
4
Structural and energetic determinants of apo calmodulin binding to the IQ motif of the Na(V)1.2 voltage-dependent sodium channel.钙调蛋白apo 结合到电压门控钠离子通道 Na(V)1.2 的 IQ 基序的结构和能量决定因素。
Structure. 2011 May 11;19(5):733-47. doi: 10.1016/j.str.2011.02.009.
5
AtBAG7, an Arabidopsis Bcl-2-associated athanogene, resides in the endoplasmic reticulum and is involved in the unfolded protein response.AtBAG7,一种拟南芥 Bcl-2 相关的泛素样蛋白,位于内质网中,并参与未折叠蛋白反应。
Proc Natl Acad Sci U S A. 2010 Mar 30;107(13):6088-93. doi: 10.1073/pnas.0912670107. Epub 2010 Mar 15.
6
The language of calcium signaling.钙信号的语言。
Annu Rev Plant Biol. 2010;61:593-620. doi: 10.1146/annurev-arplant-070109-104628.
7
The BAG proteins: a ubiquitous family of chaperone regulators.BAG蛋白:一类普遍存在的伴侣调节蛋白家族。
Cell Mol Life Sci. 2008 May;65(9):1390-402. doi: 10.1007/s00018-008-7535-2.
8
Calcium signaling.钙信号传导
Cell. 2007 Dec 14;131(6):1047-58. doi: 10.1016/j.cell.2007.11.028.
9
Solving structures of protein complexes by molecular replacement with Phaser.使用Phaser通过分子置换法解析蛋白质复合物的结构。
Acta Crystallogr D Biol Crystallogr. 2007 Jan;63(Pt 1):32-41. doi: 10.1107/S0907444906045975. Epub 2006 Dec 13.
10
Crystal structure of apo-calmodulin bound to the first two IQ motifs of myosin V reveals essential recognition features.与肌球蛋白V的前两个IQ模体结合的脱钙调蛋白的晶体结构揭示了关键的识别特征。
Proc Natl Acad Sci U S A. 2006 Dec 19;103(51):19326-31. doi: 10.1073/pnas.0609436103. Epub 2006 Dec 6.