Kim Young-Ok, Park Sooyeon, Nam Bo-Hye, Kim Dong-Gyun, Won Sung-Min, Park Ji-Min, Yoon Jung-Hoon
Biotechnology Research Division, National Fisheries Research and Development Institute (NFRDI), Busan, 619-705, Republic of Korea.
J Microbiol. 2015 Aug;53(8):495-502. doi: 10.1007/s12275-015-5075-7. Epub 2015 Jul 31.
A Gram-negative, aerobic, non-spore-forming, motile and ovoid or rod-shaped bacterial strain, designated MA2-16(T), was isolated from ark shell (Scapharca broughtonii) collected from the South Sea, South Korea. Strain MA2-16(T) was found to grow optimally at 30°C, at pH 7.0-8.0 and in the presence of 2.0% (w/v) NaCl. Neighbour-joining, maximum-likelihood and maximum-parsimony phylogenetic trees based on 16S rRNA gene sequences revealed that strain MA2-16(T) clustered with the type strain of Sedimentitalea nanhaiensis. The novel strain exhibited a 16S rRNA gene sequence similarity value of 97.1% to the type strain of S. nanhaiensis. In the neighbour-joining phylogenetic tree based on gyrB sequences, strain MA2-16(T) formed an evolutionary lineage independent of those of other taxa. Strain MA2-16(T) contained Q-10 as the predominant ubiquinone and C18:1 ω7c and 11-methyl C18:1 ω7c as the major fatty acids. The major polar lipids of strain MA2-16(T) were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, an unidentified aminolipid and an unidentified lipid. The DNA G+C content of strain MA2-16(T) was 57.7 mol% and its DNA-DNA relatedness values with the type strains of S. nanhaiensis and some phylogenetically related species of the genera Leisingera and Phaeobacter were 13-24%. On the basis of the data presented, strain MA2-16(T) is considered to represent a novel genus and novel species within the family Rhodobacteraceae, for which the name Aliisedimentitalea scapharcae gen. nov., sp. nov. is proposed. The type strain is MA2-16(T) (=KCTC 42119(T) =CECT 8598(T)).
从韩国南海采集的魁蚶(Scapharca broughtonii)中分离出一株革兰氏阴性、需氧、无芽孢、具运动性的卵形或杆状细菌菌株,命名为MA2-16(T)。发现菌株MA2-16(T)在30°C、pH 7.0 - 8.0以及2.0%(w/v)NaCl条件下生长最佳。基于16S rRNA基因序列构建的邻接法、最大似然法和最大简约法系统发育树显示,菌株MA2-16(T)与南海沉积杆菌(Sedimentitalea nanhaiensis)的模式菌株聚类。该新菌株与南海沉积杆菌模式菌株的16S rRNA基因序列相似性值为97.1%。在基于gyrB序列的邻接法系统发育树中,菌株MA2-16(T)形成了一个独立于其他分类单元的进化谱系。菌株MA2-16(T)以Q-10作为主要泛醌,以C18:1 ω7c和11-甲基C18:1 ω7c作为主要脂肪酸。菌株MA2-16(T)的主要极性脂类为磷脂酰胆碱、磷脂酰甘油、磷脂酰乙醇胺、一种未鉴定的氨基脂类和一种未鉴定的脂类。菌株MA2-16(T)的DNA G+C含量为57.7 mol%,其与南海沉积杆菌模式菌株以及一些系统发育相关的雷辛氏菌属(Leisingera)和噬纤维菌属(Phaeobacter)物种的DNA-DNA杂交值为13 - 24%。基于所提供的数据,菌株MA2-16(T)被认为代表红杆菌科(Rhodobacteraceae)内的一个新属和新物种,为此提出新属名Aliisedimentitalea和新种名scapharcae。模式菌株为MA2-16(T)(=KCTC 42119(T) =CECT 8598(T))。