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新种玫瑰海弧菌,从毛蚶中分离得到。

Roseovarius scapharcae sp. nov., isolated from ark shell Scapharca broughtonii.

作者信息

Kim Young-Ok, Park Sooyeon, Nam Bo-Hye, Park Ji-Min, Kim Dong-Gyun, Yoon Jung-Hoon

机构信息

Biotechnology Research Division, National Fisheries Research and Development Institute (NFRDI), Gijang, Busan 619-705, South Korea.

Department of Food Science and Biotechnology, Sungkyunkwan University, Jangangu, Suwon, South Korea.

出版信息

Int J Syst Evol Microbiol. 2015 Dec;65(12):4695-4700. doi: 10.1099/ijsem.0.000633. Epub 2015 Sep 24.

Abstract

A Gram-stain-negative, non-motile, aerobic and ovoid or rod-shaped bacterium, designated MA4-5T, was isolated from ark shell (Scapharca broughtonii) collected from the South Sea, South Korea. The novel strain grew optimally at 25 °C, at pH 7.0-8.0 and in the presence of 2.0 % (w/v) NaCl. Neighbour-joining and maximum-likelihood phylogenetic trees based on 16S rRNA gene sequences showed that strain MA4-5T forms a coherent cluster with the type strains of Roseovarius albus, Roseovarius aestuarii and Roseovarius nubinhibens, sharing 97.0-99.2 % sequence similarity. It exhibited 16S rRNA gene sequence similarity of 93.1-96.1 % to the type strains of other Roseovarius species. Strain MA4-5T contained Q-10 as the predominant ubiquinone and C18 : 1ω7c as the major fatty acid. The major polar lipids of strain MA4-5T were phosphatidylcholine, phosphatidylglycerol, one unidentified aminolipid and one unidentified lipid. The DNA G+C content of strain MA4-5T was 53.8 mol% and its mean DNA-DNA relatedness values with the type strains of R. albus, R. aestuarii and R. nubinhibens were 11-26 %. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, indicated that strain MA4-5T is separate from recognized species of the genus Roseovarius. On the basis of the data presented, strain MA4-5T is considered to represent a novel species of the genus Roseovarius, for which the name Roseovarius scapharcae sp. nov. is proposed. The type strain is MA4-5T ( = KCTC 42703T = NBRC 111226T).

摘要

从韩国南海采集的魁蚶(Scapharca broughtonii)中分离出一株革兰氏染色阴性、无运动性、需氧的卵形或杆状细菌,命名为MA4-5T。该新菌株在25 °C、pH 7.0-8.0和2.0 %(w/v)NaCl条件下生长最佳。基于16S rRNA基因序列构建的邻接法和最大似然法系统发育树表明,菌株MA4-5T与白色玫瑰弧菌(Roseovarius albus)、河口玫瑰弧菌(Roseovarius aestuarii)和抑制玫瑰弧菌(Roseovarius nubinhibens)的模式菌株形成一个连贯的簇,序列相似性为97.0-99.2 %。它与其他玫瑰弧菌属物种的模式菌株的16S rRNA基因序列相似性为93.1-96.1 %。菌株MA4-5T以Q-10作为主要泛醌,以C18 : 1ω7c作为主要脂肪酸。菌株MA4-5T的主要极性脂类为磷脂酰胆碱、磷脂酰甘油、一种未鉴定的氨基脂类和一种未鉴定的脂类。菌株MA4-5T的DNA G+C含量为53.8 mol%,其与白色玫瑰弧菌、河口玫瑰弧菌和抑制玫瑰弧菌模式菌株的平均DNA-DNA相关性值为11-26 %。不同的表型特征,以及系统发育和遗传独特性,表明菌株MA4-5T与已确认的玫瑰弧菌属物种不同。根据所提供的数据,菌株MA4-5T被认为代表玫瑰弧菌属的一个新物种,为此提出玫瑰魁蚶弧菌(Roseovarius scapharcae sp. nov.)这一名称。模式菌株为MA4-5T( = KCTC 42703T = NBRC 111226T)。

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