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鉴定人尿液中与衰老相关的天然存在的肽。

Identification of ageing-associated naturally occurring peptides in human urine.

作者信息

Nkuipou-Kenfack Esther, Bhat Akshay, Klein Julie, Jankowski Vera, Mullen William, Vlahou Antonia, Dakna Mohammed, Koeck Thomas, Schanstra Joost P, Zürbig Petra, Rudolph Karl L, Schumacher Björn, Pich Andreas, Mischak Harald

机构信息

Mosaiques Diagnostics GmbH, Hannover, Germany.

Hannover Medical School, Core Facility Proteomics, Hannover, Germany.

出版信息

Oncotarget. 2015 Oct 27;6(33):34106-17. doi: 10.18632/oncotarget.5896.

Abstract

To assess normal and pathological peptidomic changes that may lead to an improved understanding of molecular mechanisms underlying ageing, urinarypeptidomes of 1227 healthy and 10333 diseased individuals between 20 and 86 years of age were investigated. The diseases thereby comprised diabetes mellitus, renal and cardiovascular diseases. Using age as a continuous variable, 116 peptides were identified that significantly (p < 0.05; |ρ|≥0.2) correlated with age in the healthy cohort. The same approach was applied to the diseased cohort. Upon comparison of the peptide patterns of the two cohorts 112 common age-correlated peptides were identified. These 112 peptides predominantly originated from collagen, uromodulin and fibrinogen. While most fibrillar and basement membrane collagen fragments showed a decreased age-related excretion, uromodulin, beta-2-microglobulin and fibrinogen fragments showed an increase. Peptide-based in silico protease analysis was performed and 32 proteases, including matrix metalloproteinases and cathepsins, were predicted to be involved in ageing. Identified peptides, predicted proteases and patient information were combined in a systems biology pathway analysis to identify molecular pathways associated with normal and/or pathological ageing. While perturbations in collagen homeostasis, trafficking of toll-like receptors and endosomal pathways were commonly identified, degradation of insulin-like growth factor-binding proteins was uniquely identified in pathological ageing.

摘要

为了评估可能有助于更好地理解衰老潜在分子机制的正常和病理性肽组变化,对1227名20至86岁的健康个体和10333名患病个体的尿液肽组进行了研究。这些疾病包括糖尿病、肾脏疾病和心血管疾病。将年龄作为连续变量,在健康队列中鉴定出116种与年龄显著相关(p < 0.05;|ρ|≥0.2)的肽。对患病队列采用同样的方法。比较两个队列的肽谱后,鉴定出112种与年龄相关的常见肽。这112种肽主要来源于胶原蛋白、尿调节蛋白和纤维蛋白原。虽然大多数纤维状和基底膜胶原蛋白片段的年龄相关排泄量减少,但尿调节蛋白、β-2-微球蛋白和纤维蛋白原片段的排泄量增加。进行了基于肽的计算机蛋白酶分析,预测包括基质金属蛋白酶和组织蛋白酶在内的32种蛋白酶与衰老有关。将鉴定出的肽、预测的蛋白酶和患者信息结合到系统生物学通路分析中,以识别与正常和/或病理性衰老相关的分子通路。虽然通常发现胶原蛋白稳态、Toll样受体运输和内体途径存在扰动,但在病理性衰老中独特地发现了胰岛素样生长因子结合蛋白的降解。

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