Liu Chang, Zhang Xi-Ying, Wen Xi-Ruo, Shi Mei, Chen Xiu-Lan, Su Hai-Nan
State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Jinan 250100, PR China.
Beijing National Day School, Beijing 100039, PR China.
Int J Syst Evol Microbiol. 2016 Jan;66(1):144-149. doi: 10.1099/ijsem.0.000681. Epub 2015 Oct 15.
A yellow-pigmented, rod-shaped, non-flagellated, aerobic and Gram-reaction-negative bacterium, designated strain SM1212T, was isolated from intertidal sand of Kongsfjorden, Svalbard. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain SM1212T constituted a distinct lineage within the family Flavobacteriaceae. It shared highest 16S rRNA gene sequence similarities with the type strains of Bizionia echini (96.0 %), Lacinutrix jangbogonensis (95.8 %) and Psychroserpens damuponensis (95.7 %) and < 95.6 % sequence similarity with other recognized species in the family Flavobacteriaceae. The strain grew at 4-35 °C and with 0-6.0 % (w/v) NaCl. It hydrolysed gelatin, DNA, starch and Tween 80 but did not reduce nitrate to nitrite. The major cellular fatty acids were anteiso-C15 : 0, iso-C15 : 0, iso-C15 : 1 G, anteiso-C15 : 1 A, iso-C15 : 0 3-OH, C17 : 0 2-OH and iso-C17 : 0 3-OH and the major respiratory quinone was menaquinone MK-6. Polar lipids included phosphatidylethanolamine, one unidentified phospholipid, one unidentified aminophospholipid, three unidentified aminolipids and nine unidentified lipids. The genomic DNA G+C content of strain SM1212T was 36.6 mol%. On the basis of data from this polyphasic study, strain SM1212T represents a novel species in a new genus in the family Flavobacteriaceae, for which the name Arcticiflavibacter luteus gen. nov., sp. nov. is proposed. The type strain of Arcticiflavibacter luteus is SM1212T ( = MCCC 1K00234T = KCTC 32514T).
从斯瓦尔巴群岛孔斯峡湾的潮间带沙滩中分离出一株黄色色素沉着、杆状、无鞭毛、需氧且革兰氏阴性的细菌,命名为SM1212T菌株。基于16S rRNA基因序列的系统发育分析表明,SM1212T菌株在黄杆菌科内构成一个独特的谱系。它与刺海胆比齐奥菌(96.0%)、长波湾乳杆菌(95.8%)和达蒙嗜冷蛇菌(95.7%)的模式菌株具有最高的16S rRNA基因序列相似性,与黄杆菌科其他已确认的物种序列相似性<95.6%。该菌株在4-35°C和0-6.0%(w/v)NaCl条件下生长。它能水解明胶、DNA、淀粉和吐温80,但不将硝酸盐还原为亚硝酸盐。主要的细胞脂肪酸为anteiso-C15:0、iso-C15:0、iso-C15:1 G、anteiso-C15:1 A、iso-C15:0 3-OH、C17:0 2-OH和iso-C17:0 3-OH,主要的呼吸醌为甲基萘醌MK-6。极性脂质包括磷脂酰乙醇胺、一种未鉴定的磷脂、一种未鉴定的氨基磷脂、三种未鉴定的氨基脂质和九种未鉴定的脂质。SM1212T菌株的基因组DNA G+C含量为36.6 mol%。基于这一多相研究的数据,SM1212T菌株代表黄杆菌科一个新属中的一个新物种,为此提出新属名为北极黄杆菌属(Arcticiflavibacter),新种名为黄色北极黄杆菌(Arcticiflavibacter luteus)。黄色北极黄杆菌的模式菌株为SM1212T(=MCCC 1K00234T=KCTC 32514T)。