Wang Ping, Fu Haiying, Cui Jiayue, Chen Xia
Department of Otolaryngology‑Head and Neck Surgery, First Hospital of Jilin University, Changchun, Jilin 130021, P.R. China.
Department of Immunology, College of Basic Medical Sciences, Jilin University, Changchun, Jilin 130000, P.R. China.
Mol Med Rep. 2016 Feb;13(2):1195-203. doi: 10.3892/mmr.2015.4669. Epub 2015 Dec 10.
Previous studies have reported that long, non‑coding RNAs (lncRNAs) are important in cardiovascular disease. However, the lncRNAs involved in myocardial infarction and their detailed mechanism have not been well characterized. In the present study, an affymetrix microarray associated with myocardial infarction was re‑annotated, following which a myocardial infarction‑related differential lncRNA‑mRNA co‑expression network (MILMN) was constructed. Subsequently, pathway enrichment analysis was used for all the mRNAs in the MILMN, and an lncRNA‑pathway network was constructed. It was found that the mRNAs were predominantly involved in certain cardiovascular disease‑associated pathway, for example the dilated cardiomyopathy and mitogen‑activated protein kinase signaling pathway. Finally, a total of 39 key lncRNAs were identified, which regulate crucial pathways in myocardial infarction. Through pathway analysis of these 39 key lncRNAs, the novel function of an annotated lncRNAs‑H19 was predicted, which may regulate apoptosis signal‑regulating kinase, which is a protein that promotes pathological cardiac remodeling following myocardial infarction. The results of the present study not only provide potential non‑coding RNA biomarkers, but also provide further insights into understanding the molecular mechanism of lncRNAs.
先前的研究报道,长链非编码RNA(lncRNA)在心血管疾病中起重要作用。然而,参与心肌梗死的lncRNA及其详细机制尚未得到充分表征。在本研究中,对与心肌梗死相关的Affymetrix微阵列进行了重新注释,随后构建了心肌梗死相关的差异lncRNA-mRNA共表达网络(MILMN)。随后,对MILMN中的所有mRNA进行通路富集分析,并构建lncRNA-通路网络。发现这些mRNA主要参与某些与心血管疾病相关的通路,例如扩张型心肌病和丝裂原活化蛋白激酶信号通路。最后,共鉴定出39个关键lncRNA,它们调节心肌梗死中的关键通路。通过对这39个关键lncRNA的通路分析,预测了一个已注释的lncRNA-H19的新功能,它可能调节凋亡信号调节激酶,这是一种在心肌梗死后促进病理性心脏重塑的蛋白质。本研究结果不仅提供了潜在的非编码RNA生物标志物,还为深入了解lncRNA的分子机制提供了进一步的见解。